CAZyme3D

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Entry ID

Information for CAZyme ID: AIS02041.1

Basic Information

GenBank IDAIS02041.1
FamilyCBM32, GH55
Sequence Length728
UniProt IDA0A089Z8D0(100,100)Download
Average pLDDT?93.60
CAZy50 ID21571
CAZy50 RepNo, QNA76655.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1907
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces glaucescens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPSVGIPPAL  RRSGPATRRA  TAGALVSSLV  GTLLALVPAA  PATAAETLLS  QGRPATASST60
EGAAFAAPAA  VDGNLTGTRW  ASQWSDNQWF  QVDLGQRTAI  SRVVLTWEAA  YGKAYDIQLS120
DNGSDWRTVR  SVTAGDGGTD  DLTVSGTGRY  VRLQGVTRGT  GYGYSLWEFQ  VYGGTGDTPQ180
LPGGGDLGPN  VHVIDPSTPD  IQGKLDAVFK  QQESAQFGTG  RHAFLFKPGT  YNNLNAQIGF240
YTQIAGLGLK  PDDTLINGDI  TVDAGWFNGN  ATQNFWRGAE  NLAVNPVNGT  NRWAVSQASS300
FRRMHVKGGL  NLAPNGYGWA  SGGYIADSKI  DGQIGNYSQQ  QWYTRDSSIG  GWSNSVWNQV360
FSGVEGAPAN  SFPEPRYTTL  ASTPVSREKP  FLYLDGNEYK  VFAPAKRTNA  RGTTWASGTP420
QGESIPLSRF  YVVKPGTTAA  TINQALAQGL  HLLFTPGVYH  VDRTIDVNRA  GTIVLGLGLA480
TIIPDNGVTA  MRVADVDGVR  LAGFLIDAGP  VNSPTLLEVG  PQNASADHSA  NPTTVQDVYI540
RIGGAGAGKA  TTSMVVNNDD  TIIDHTWVWR  ADHGEGVGWE  TNRADYGVRV  NGDDVLATGL600
FVEHFNKYDV  EWYGERGRTI  FFQNEKAYDA  PNQAAIQNGA  TKGYAAYRVD  DSVNTHEGWG660
MGSYCYYNVD  PTIRQDHGFK  APVKPGVRFH  SLLTVSLGGN  GHFEHVINDT  GAPTQGTETV720
PSTVVSFP728

Predicted 3D structure by AlphaFold2 with pLDDT = 93.60 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM32(56-170)+GH55(412-712)

MPSVGIPPAL  RRSGPATRRA  TAGALVSSLV  GTLLALVPAA  PATAAETLLS  QGRPATASST60
EGAAFAAPAA  VDGNLTGTRW  ASQWSDNQWF  QVDLGQRTAI  SRVVLTWEAA  YGKAYDIQLS120
DNGSDWRTVR  SVTAGDGGTD  DLTVSGTGRY  VRLQGVTRGT  GYGYSLWEFQ  VYGGTGDTPQ180
LPGGGDLGPN  VHVIDPSTPD  IQGKLDAVFK  QQESAQFGTG  RHAFLFKPGT  YNNLNAQIGF240
YTQIAGLGLK  PDDTLINGDI  TVDAGWFNGN  ATQNFWRGAE  NLAVNPVNGT  NRWAVSQASS300
FRRMHVKGGL  NLAPNGYGWA  SGGYIADSKI  DGQIGNYSQQ  QWYTRDSSIG  GWSNSVWNQV360
FSGVEGAPAN  SFPEPRYTTL  ASTPVSREKP  FLYLDGNEYK  VFAPAKRTNA  RGTTWASGTP420
QGESIPLSRF  YVVKPGTTAA  TINQALAQGL  HLLFTPGVYH  VDRTIDVNRA  GTIVLGLGLA480
TIIPDNGVTA  MRVADVDGVR  LAGFLIDAGP  VNSPTLLEVG  PQNASADHSA  NPTTVQDVYI540
RIGGAGAGKA  TTSMVVNNDD  TIIDHTWVWR  ADHGEGVGWE  TNRADYGVRV  NGDDVLATGL600
FVEHFNKYDV  EWYGERGRTI  FFQNEKAYDA  PNQAAIQNGA  TKGYAAYRVD  DSVNTHEGWG660
MGSYCYYNVD  PTIRQDHGFK  APVKPGVRFH  SLLTVSLGGN  GHFEHVINDT  GAPTQGTETV720
PSTVVSFP728

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help