Information for CAZyme ID: AIQ56480.1
Basic Information
| GenBank ID | AIQ56480.1 |
| Family | PL12 |
| Sequence Length | 739 |
| UniProt ID | A0A089L8S7(100,100) |
| Average pLDDT? | 93.24 |
| CAZy50 ID | 33815 |
| CAZy50 Rep | No, UQZ35705.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 160799 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus borealis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTIGYKDLRH NPVYTKPQLS DEEFLGTMLD LSRPELGGVA AYLKSGDVPA ARNAYLELIA | 60 |
| AGNNGRYYFE VKDVPKLQAY AASRYSHEEE AVQSIAEADR IVEGDIPLFK GKRVVFPRGT | 120 |
| YDWNSWLYDS SQYQLHLTRF VYVKHLSRAY ALTGDEKYAK CFNDMMEDFI DDNRVPVDDT | 180 |
| FRSEHSTWDP LSVGVRLFML PEAFITFFSS PAFEPEVKLK LIKSFHEHGQ YVRKYHASGG | 240 |
| NHVCMQLRGL IQTALLLPEL KESAEWLEYG MRELPGYIRQ NVYADGVQFE GSPNYHLVVM | 300 |
| RDLYELVALF HKLGIAAEEY RETLEKMFTV TMHLLAPDGQ LVKFGDTDVQ VVSELRNVMS | 360 |
| LGAYLYQRGD FKTLGHERLP FSLLWRVGPE AVQQYEQLKA KQPAETAACF PIGGYISSRQ | 420 |
| GWNREDMYMA MRAGVGVGGH AHSDALSLVL YAGGRELLTD SGMGLFEWNK ERKYTVSTRA | 480 |
| HNTVVVDGQD QHVRSFHWNT PTTAACRIWD VQSSAAYDYS FASHYGYTCY VDPVIHSRKV | 540 |
| LFIKNSYWLI VDLFEAEEQH RYEQYFHLPT GGAGYDCRSG EISTQLEEAN LLLKHLPAGC | 600 |
| ADDQLVLEPG LIFKQGEYAE SPVVKRSLTM AGRAAIVTLA VPFGTEKPKV TVEQLPARMN | 660 |
| GKELSAEEAT ALRIIMEDRV DEICLYHGSV EVAGYLDHTG NIIAEALLPR KEEPEGLEFA | 720 |
| GRSYSRDVIV ITASKEHSG | 739 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.24 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : PL12(415-552)
| MTIGYKDLRH NPVYTKPQLS DEEFLGTMLD LSRPELGGVA AYLKSGDVPA ARNAYLELIA | 60 |
| AGNNGRYYFE VKDVPKLQAY AASRYSHEEE AVQSIAEADR IVEGDIPLFK GKRVVFPRGT | 120 |
| YDWNSWLYDS SQYQLHLTRF VYVKHLSRAY ALTGDEKYAK CFNDMMEDFI DDNRVPVDDT | 180 |
| FRSEHSTWDP LSVGVRLFML PEAFITFFSS PAFEPEVKLK LIKSFHEHGQ YVRKYHASGG | 240 |
| NHVCMQLRGL IQTALLLPEL KESAEWLEYG MRELPGYIRQ NVYADGVQFE GSPNYHLVVM | 300 |
| RDLYELVALF HKLGIAAEEY RETLEKMFTV TMHLLAPDGQ LVKFGDTDVQ VVSELRNVMS | 360 |
| LGAYLYQRGD FKTLGHERLP FSLLWRVGPE AVQQYEQLKA KQPAETAACF PIGGYISSRQ | 420 |
| GWNREDMYMA MRAGVGVGGH AHSDALSLVL YAGGRELLTD SGMGLFEWNK ERKYTVSTRA | 480 |
| HNTVVVDGQD QHVRSFHWNT PTTAACRIWD VQSSAAYDYS FASHYGYTCY VDPVIHSRKV | 540 |
| LFIKNSYWLI VDLFEAEEQH RYEQYFHLPT GGAGYDCRSG EISTQLEEAN LLLKHLPAGC | 600 |
| ADDQLVLEPG LIFKQGEYAE SPVVKRSLTM AGRAAIVTLA VPFGTEKPKV TVEQLPARMN | 660 |
| GKELSAEEAT ALRIIMEDRV DEICLYHGSV EVAGYLDHTG NIIAEALLPR KEEPEGLEFA | 720 |
| GRSYSRDVIV ITASKEHSG | 739 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.