CAZyme3D

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Entry ID

Information for CAZyme ID: AIQ52466.1

Basic Information

GenBank IDAIQ52466.1
FamilyGH94
Sequence Length1127
UniProt IDA0A089KTH2(100,100)Download
Average pLDDT?93.96
CAZy50 ID9064
CAZy50 RepNo, ADM68187.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1536773
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. FSL R7-0331

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTTVTGTKLN  LQKGGLTFTF  LESGDLYQAS  GGQMMINQLL  ANSIDGAAGN  LYIRLYQPDG60
IQAYPLLGVK  SGSTFSRDGE  RLIWQGEVPA  DTGAHGSAEK  LAYQVTFTLT  EADIWFWDIR120
VEGKAAMLDV  IYAQDVGIAA  PGAVTSNEAY  LSQYIDHAVF  TDQAGGYVVC  SRQNQPQGGK180
FPYLQQGLIG  GAAGYSTDGF  QFFGLSYKET  DRPEALYQES  LANKVYQYEF  AYTALQSPKT240
ELDGEAAFTF  YGLFREDHPA  AVTGLEYAGE  LQTAWSSVQK  LAPVKPEGNK  QIPEPAAARI300
GTPLQTLALS  IAELDTLFPQ  RFQEERQDGE  LLAFFTGTYE  HIVLKSKELL  VERPHGHILM360
SGDNARLDAE  VMTTTSYMYG  IFNSQVVVGN  TNFNKMLSNA  RNALNVNKTS  GQRIYVELDG420
QFRLLTMPSL  FEIGFNYARW  HYKSAGDTFI  ITNYTAVKAP  EIRLHVASAS  GKAYRFLVSN480
QITMNVAEYE  LPYQMEPAAD  GGLVFRAGDK  GFSTAVYPEL  AYKITIEGAA  FRTGDESLLA540
AGAEPGSASL  TVLELDSSSE  WTLTFQGMLD  GESRPAAAAG  FEAETKNYRE  FLAGVMNGFQ600
LKKESGEQAE  LFKVNALAWW  YTHNMLVHYS  VPHGLEQYGG  AAWGTRDVCQ  GPVEYFLATH660
KYGQVREILL  TVFAHQYEDD  GNWPQWFMFD  RYTSVQQEES  HGDIIVWPLK  VLGDYLRATR720
DYAVLDERIP  YTRKHSFDFT  ETAFTLREHA  LKELEYIKSH  FLHDTCLSSY  GDGDWDDTLQ780
PANAQLKQYM  VSSWTVALTY  QTVRGLSNVL  RDTDAGWSDE  LMQMAEGIKA  DFNRYMLGTE840
VIPGFLYFED  PEQAKLMLHP  EDKETGIQYR  LLPMTRSMIG  ELLTPEQMEA  HYTLIQDQFL900
CPDGVRLMNH  PAQYAGGVST  HFKRAEQAAN  FGREIGLQYV  HAHIRFVEAM  AKTGKTDQVW960
KGLATINPVG  IRDAVPNAEL  RQSNAYFSSS  DGKFDNRYEA  QECFQELRDG  SVPVKGGWRI1020
YSSGPGIYMN  QLISNVLGIR  EEGGDLILDP  VLPAELDGTR  FEFEYGGSPV  TFIYHCKEGG1080
LRSAAVNGQE  VQAMRLANPY  RLGGLQIARE  EIQRLADPER  TVIDIYM1127

Predicted 3D structure by AlphaFold2 with pLDDT = 93.96 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH94(106-1095)

MTTVTGTKLN  LQKGGLTFTF  LESGDLYQAS  GGQMMINQLL  ANSIDGAAGN  LYIRLYQPDG60
IQAYPLLGVK  SGSTFSRDGE  RLIWQGEVPA  DTGAHGSAEK  LAYQVTFTLT  EADIWFWDIR120
VEGKAAMLDV  IYAQDVGIAA  PGAVTSNEAY  LSQYIDHAVF  TDQAGGYVVC  SRQNQPQGGK180
FPYLQQGLIG  GAAGYSTDGF  QFFGLSYKET  DRPEALYQES  LANKVYQYEF  AYTALQSPKT240
ELDGEAAFTF  YGLFREDHPA  AVTGLEYAGE  LQTAWSSVQK  LAPVKPEGNK  QIPEPAAARI300
GTPLQTLALS  IAELDTLFPQ  RFQEERQDGE  LLAFFTGTYE  HIVLKSKELL  VERPHGHILM360
SGDNARLDAE  VMTTTSYMYG  IFNSQVVVGN  TNFNKMLSNA  RNALNVNKTS  GQRIYVELDG420
QFRLLTMPSL  FEIGFNYARW  HYKSAGDTFI  ITNYTAVKAP  EIRLHVASAS  GKAYRFLVSN480
QITMNVAEYE  LPYQMEPAAD  GGLVFRAGDK  GFSTAVYPEL  AYKITIEGAA  FRTGDESLLA540
AGAEPGSASL  TVLELDSSSE  WTLTFQGMLD  GESRPAAAAG  FEAETKNYRE  FLAGVMNGFQ600
LKKESGEQAE  LFKVNALAWW  YTHNMLVHYS  VPHGLEQYGG  AAWGTRDVCQ  GPVEYFLATH660
KYGQVREILL  TVFAHQYEDD  GNWPQWFMFD  RYTSVQQEES  HGDIIVWPLK  VLGDYLRATR720
DYAVLDERIP  YTRKHSFDFT  ETAFTLREHA  LKELEYIKSH  FLHDTCLSSY  GDGDWDDTLQ780
PANAQLKQYM  VSSWTVALTY  QTVRGLSNVL  RDTDAGWSDE  LMQMAEGIKA  DFNRYMLGTE840
VIPGFLYFED  PEQAKLMLHP  EDKETGIQYR  LLPMTRSMIG  ELLTPEQMEA  HYTLIQDQFL900
CPDGVRLMNH  PAQYAGGVST  HFKRAEQAAN  FGREIGLQYV  HAHIRFVEAM  AKTGKTDQVW960
KGLATINPVG  IRDAVPNAEL  RQSNAYFSSS  DGKFDNRYEA  QECFQELRDG  SVPVKGGWRI1020
YSSGPGIYMN  QLISNVLGIR  EEGGDLILDP  VLPAELDGTR  FEFEYGGSPV  TFIYHCKEGG1080
LRSAAVNGQE  VQAMRLANPY  RLGGLQIARE  EIQRLADPER  TVIDIYM1127

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help