CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AIQ49912.1

Basic Information

GenBank IDAIQ49912.1
FamilyGH126
Sequence Length378
UniProt IDA0A089KND6(100,100)Download
Average pLDDT?88.86
CAZy50 ID102893
CAZy50 RepNo, ANY65878.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1536772
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. FSL R7-0273

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLLATLTVVA  LLTGCSNKAE  PVPPATAEVT  SKPSPTPGWP  PEGISGEEQQ  LKAFIASKLT60
GPYGIYTNLI  DTDQSAEAAT  GHEVLSESAS  LMMLSAVRDG  DAGAFAEQWE  LGKQVFGMEG120
GFGYRYSPKL  DRQYTVNAAV  DDLRIIEALY  EAGELFAEPA  YKEEMELYSR  QFYNNNVRDG180
YMLDIYDNYY  HNNNEFITLC  YIRLSVLQNL  SIDSESKGIL  MHNMSEILED  GYLSDAFPFY240
ETRFDYPSGT  YRSENINTVE  SLLSILNLTE  VGRENPESLR  FIREKVEAGT  LYGQYTREGA300
PANDIRSTAI  YALTAMIGAA  VGDEALYAAG  IERMNEFRIT  DPESPLYGGF  GDTNTGQAYS360
FDNLMALLAY  SYFPKNEQ378

Predicted 3D structure by AlphaFold2 with pLDDT = 88.86 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH126(51-370)

MLLATLTVVA  LLTGCSNKAE  PVPPATAEVT  SKPSPTPGWP  PEGISGEEQQ  LKAFIASKLT60
GPYGIYTNLI  DTDQSAEAAT  GHEVLSESAS  LMMLSAVRDG  DAGAFAEQWE  LGKQVFGMEG120
GFGYRYSPKL  DRQYTVNAAV  DDLRIIEALY  EAGELFAEPA  YKEEMELYSR  QFYNNNVRDG180
YMLDIYDNYY  HNNNEFITLC  YIRLSVLQNL  SIDSESKGIL  MHNMSEILED  GYLSDAFPFY240
ETRFDYPSGT  YRSENINTVE  SLLSILNLTE  VGRENPESLR  FIREKVEAGT  LYGQYTREGA300
PANDIRSTAI  YALTAMIGAA  VGDEALYAAG  IERMNEFRIT  DPESPLYGGF  GDTNTGQAYS360
FDNLMALLAY  SYFPKNEQ378

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help