CAZyme3D

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Entry ID

Information for CAZyme ID: AIQ45819.1

Basic Information

GenBank IDAIQ45819.1
FamilyCBM34, GH13_20
Sequence Length579
UniProt IDA0A089LMA4(100,100)Download
Average pLDDT?96.45
CAZy50 ID44738
CAZy50 RepNo, CAZ78882.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1536772
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. FSL R7-0273

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MHLESLHHVP  HSNWSYPYDK  DTFHLRVRTK  KQNVERIYAL  TGDKYDWETY  HHEYEMQKVG60
TDRLFDYWQT  TVKPDHRRFS  YAFRFHSGAE  TIWMTENGIF  IEEPEAPGGF  FDWPYIHEVD120
IFQAPEWAKS  AVFYQIMPER  FANGDTSNDP  EDISPWGGKP  ATDNFFGGDL  QGIIDHLDYL180
EDLGITAIYL  TPIFEAPTNH  KYDTTDYMTI  DPHFGDTELL  KKLVDEAHSK  GIRIVLDAVF240
NHIGSNSPQF  KDVTLHGEKS  KYADWFHINE  FPVQVKDGKP  TYDAFGFFAE  MPKLNTANPE300
TREYLLNIAE  YWLKELGMDG  WRLDVANEID  HKFWKEFRTR  IKAINPDAYI  IGENWNDSLR360
WLHGDQFDSV  MNYPLSNRLI  EFLQGDDMDA  QTFSEYISGL  LMRYPQQANE  VLFNLLASHD420
TPRLLTQLGG  DKNKLKLAVA  FLLTFTGTPC  IYYGDEIGLD  GEGDPDCRKC  MIWEEEHQDR480
DLHHTYKQLI  RLRKEHPVLR  TGEFRFLQSN  QQERPLIYER  YNAEEHCTVW  MNPSAEPAAL540
VQALEGNWKD  ALSGEAAAAD  NGEIRLKLEP  FSFRVLFKD579

Predicted 3D structure by AlphaFold2 with pLDDT = 96.45 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM34(7-121)+GH13_20(168-465)

MHLESLHHVP  HSNWSYPYDK  DTFHLRVRTK  KQNVERIYAL  TGDKYDWETY  HHEYEMQKVG60
TDRLFDYWQT  TVKPDHRRFS  YAFRFHSGAE  TIWMTENGIF  IEEPEAPGGF  FDWPYIHEVD120
IFQAPEWAKS  AVFYQIMPER  FANGDTSNDP  EDISPWGGKP  ATDNFFGGDL  QGIIDHLDYL180
EDLGITAIYL  TPIFEAPTNH  KYDTTDYMTI  DPHFGDTELL  KKLVDEAHSK  GIRIVLDAVF240
NHIGSNSPQF  KDVTLHGEKS  KYADWFHINE  FPVQVKDGKP  TYDAFGFFAE  MPKLNTANPE300
TREYLLNIAE  YWLKELGMDG  WRLDVANEID  HKFWKEFRTR  IKAINPDAYI  IGENWNDSLR360
WLHGDQFDSV  MNYPLSNRLI  EFLQGDDMDA  QTFSEYISGL  LMRYPQQANE  VLFNLLASHD420
TPRLLTQLGG  DKNKLKLAVA  FLLTFTGTPC  IYYGDEIGLD  GEGDPDCRKC  MIWEEEHQDR480
DLHHTYKQLI  RLRKEHPVLR  TGEFRFLQSN  QQERPLIYER  YNAEEHCTVW  MNPSAEPAAL540
VQALEGNWKD  ALSGEAAAAD  NGEIRLKLEP  FSFRVLFKD579

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help