CAZyme3D

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Entry ID

Information for CAZyme ID: AIQ18506.1

Basic Information

GenBank IDAIQ18506.1
FamilyCE2
Sequence Length350
UniProt IDA0A089I2N4(100,100)Download
Average pLDDT?97.77
CAZy50 ID60863
CAZy50 RepNo, ACZ98667.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1536774
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. FSL H7-0357

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFKATEPHVK  IIGRTHYYNE  VLWLALSGGG  VEFSFHGRKA  EITLKGDAVA  STGNNLARIG60
ISVNGKRVID  DQLDTPIKTY  TVFESDTVQD  ITVTVIKLSE  AAMSTVGIQE  IAVDAADGIK120
PTPPKLHTIE  FIGDSITCGY  GVDDEYELHS  FSTATEDVTK  TYAYLTAQQL  KADYSMVSYS180
GYGIITGYTE  NDQKLTTHLI  PDYYEKVGKS  EGGFEGTLLP  QEVYWDFNKF  VPDLIIINLG240
TNDDSYTKEE  ASKQAEYARK  YIEFLKMVRR  NNPHASILCT  LGIMGDRLYP  YVEQAVSGYS300
RETADSNITT  MKFDEQLAAD  GYAADFHPSQ  ATHSKAANKL  TAQIKELMKW  350

Predicted 3D structure by AlphaFold2 with pLDDT = 97.77 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(129-344)

MFKATEPHVK  IIGRTHYYNE  VLWLALSGGG  VEFSFHGRKA  EITLKGDAVA  STGNNLARIG60
ISVNGKRVID  DQLDTPIKTY  TVFESDTVQD  ITVTVIKLSE  AAMSTVGIQE  IAVDAADGIK120
PTPPKLHTIE  FIGDSITCGY  GVDDEYELHS  FSTATEDVTK  TYAYLTAQQL  KADYSMVSYS180
GYGIITGYTE  NDQKLTTHLI  PDYYEKVGKS  EGGFEGTLLP  QEVYWDFNKF  VPDLIIINLG240
TNDDSYTKEE  ASKQAEYARK  YIEFLKMVRR  NNPHASILCT  LGIMGDRLYP  YVEQAVSGYS300
RETADSNITT  MKFDEQLAAD  GYAADFHPSQ  ATHSKAANKL  TAQIKELMKW  350

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help