CAZyme3D

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Entry ID

Information for CAZyme ID: AIO02860.1

Basic Information

GenBank IDAIO02860.1
FamilyAA3_2
Sequence Length668
UniProt IDA0A088S376(100,100)Download
Average pLDDT?86.32
CAZy50 ID42640
CAZy50 RepNo, AIO02865.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID7091
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderLepidoptera
FamilyBombycidae
GenusBombyx
SpeciesBombyx mori

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVCGLTSCLG  SGAAGGLFSS  AVQFFAATQC  LVGETWPKDS  VLQNGSRYDF  IIVGAGTAGS60
ALAARLSEVA  NFSVLLLEAG  GDPPIEAIIP  AFRETLKASS  VDWNFTSVEN  NITSQALKRG120
IEQQPRGKML  GGTGSLNHMV  YARGFPSDYH  EWASIAGETW  NWTNVLKYFM  KTEHMTDTNI180
VNNPELMVYH  GRGGAIEVSG  TNEVMFSIKK  FLQAFEELGF  KTVPDMTYPN  SIGAGCFSHT240
IRNGERDSSL  RALLNNANST  SLHILKDAFV  TKIIIENGTA  IGIEAVKDDK  KFLFYADREV300
ILSAGTFNTP  KLLMLSGVGP  SEHLRSLGID  VVADLPVGSN  LHDHVMVLAF  LVADNGTCVS360
DEAENSMEAI  KYLYDRTGFL  AKADNMAAYL  PLSSSEPTVP  EFALYPTCIP  QFSPFRSGCL420
TLGLNEDLCT  ELHNLNQEYE  LVTIAAVLLK  PKSRGKVELN  SINPFDDPLI  YAGTFSEEQD480
LDHFPRLIKM  AWSIADTNYF  RSKNARVIKP  WVEACSNLTE  SAWIKCMSRA  MVTSAWHSVG540
TAAMGTVVDG  DLKVLGINGL  RVVDASVMPK  IIRGNTNAPV  VMIAEIAADL  IKEHYSVSRT600
GTNLNNMTIG  NLTASSMPNI  SQPNINLADV  IENNDMINSS  LIEVEITNVE  IITTTDRQSD660
IDDTVNVA668

Predicted 3D structure by AlphaFold2 with pLDDT = 86.32 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA3_2(47-593)

MVCGLTSCLG  SGAAGGLFSS  AVQFFAATQC  LVGETWPKDS  VLQNGSRYDF  IIVGAGTAGS60
ALAARLSEVA  NFSVLLLEAG  GDPPIEAIIP  AFRETLKASS  VDWNFTSVEN  NITSQALKRG120
IEQQPRGKML  GGTGSLNHMV  YARGFPSDYH  EWASIAGETW  NWTNVLKYFM  KTEHMTDTNI180
VNNPELMVYH  GRGGAIEVSG  TNEVMFSIKK  FLQAFEELGF  KTVPDMTYPN  SIGAGCFSHT240
IRNGERDSSL  RALLNNANST  SLHILKDAFV  TKIIIENGTA  IGIEAVKDDK  KFLFYADREV300
ILSAGTFNTP  KLLMLSGVGP  SEHLRSLGID  VVADLPVGSN  LHDHVMVLAF  LVADNGTCVS360
DEAENSMEAI  KYLYDRTGFL  AKADNMAAYL  PLSSSEPTVP  EFALYPTCIP  QFSPFRSGCL420
TLGLNEDLCT  ELHNLNQEYE  LVTIAAVLLK  PKSRGKVELN  SINPFDDPLI  YAGTFSEEQD480
LDHFPRLIKM  AWSIADTNYF  RSKNARVIKP  WVEACSNLTE  SAWIKCMSRA  MVTSAWHSVG540
TAAMGTVVDG  DLKVLGINGL  RVVDASVMPK  IIRGNTNAPV  VMIAEIAADL  IKEHYSVSRT600
GTNLNNMTIG  NLTASSMPNI  SQPNINLADV  IENNDMINSS  LIEVEITNVE  IITTTDRQSD660
IDDTVNVA668

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help