Information for CAZyme ID: AII53124.1
Basic Information
GenBank ID | AII53124.1 |
Family | GT51 |
Sequence Length | 716 |
UniProt ID | A0A076HZI6(100,100)![]() |
Average pLDDT? | 83.05 |
CAZy50 ID | 34368 |
CAZy50 Rep | No, UOG73680.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1356852 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Cytophagia |
Order | Cytophagales |
Family | Hymenobacteraceae |
Genus | Hymenobacter |
Species | Hymenobacter sp. APR13 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTPATKKKIA IGLGIVVALL ALGLTVFLLK RQQLLDYAIR QATAKVERKY PVTLALGPAR | 60 |
FTDLNTVQIA GMSLVPEAAP TDTLLQARLL TVSLSVRSLF AGRPVFSNLE ISDARFTARK | 120 |
TRSGQDNYSF LYRKKGAQPE VPRDTTQGVN YGLLANQLLE AGFDNMPGEA DFQNFLVTYD | 180 |
SPRHRARVVM PRLSIEDGDI QGQLTAVIDS VENRVGVQGH IEPGDYALQA EVFGLERRPV | 240 |
TLPYVQRRYG ARVQFDTLRF SLTEKELDDD QLTVRGTASA ANFIVNHPKL SDRDVRFPRG | 300 |
GIDFVATLGQ AYAALEKGTK VTLNRMEFYP TLSVRKLPLN QRVVGKMING VRNRREMLAG | 360 |
LQVQADIESA ETAANTFFAA LPEGMFNTLE GMQGSGTLQY RMHLDLDMNQ VDSLEFSSSL | 420 |
TPKDFRITRM GREDLNQLNQ AFRYTAYNDK GDSIKTFKVG PVNPDFVPYD AVSDYLKAAI | 480 |
MTAEDPRFLS HKGFMEKAFV KSAIQNIKEK RFARGGSTIS MQLVKNVFLT RQKTVTRKIE | 540 |
EALIVWLIEN TRLVSKERMF EVYLNIIEWG PKIYGVKEAA EFYYAKEPSE LNLSESLYMA | 600 |
SIIPRPRRYQ MSFNQYGEMR SAARYFHRLI ADLMLQKGLI SDGARNTLSY SLSFPGRAHG | 660 |
SIFRAVRDTV RATQPSDSTQ FEPLNLIDLL GGNAAPDEGV NTTVPAPAEG TPVPKP | 716 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.05 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(454-615)
MTPATKKKIA IGLGIVVALL ALGLTVFLLK RQQLLDYAIR QATAKVERKY PVTLALGPAR | 60 |
FTDLNTVQIA GMSLVPEAAP TDTLLQARLL TVSLSVRSLF AGRPVFSNLE ISDARFTARK | 120 |
TRSGQDNYSF LYRKKGAQPE VPRDTTQGVN YGLLANQLLE AGFDNMPGEA DFQNFLVTYD | 180 |
SPRHRARVVM PRLSIEDGDI QGQLTAVIDS VENRVGVQGH IEPGDYALQA EVFGLERRPV | 240 |
TLPYVQRRYG ARVQFDTLRF SLTEKELDDD QLTVRGTASA ANFIVNHPKL SDRDVRFPRG | 300 |
GIDFVATLGQ AYAALEKGTK VTLNRMEFYP TLSVRKLPLN QRVVGKMING VRNRREMLAG | 360 |
LQVQADIESA ETAANTFFAA LPEGMFNTLE GMQGSGTLQY RMHLDLDMNQ VDSLEFSSSL | 420 |
TPKDFRITRM GREDLNQLNQ AFRYTAYNDK GDSIKTFKVG PVNPDFVPYD AVSDYLKAAI | 480 |
MTAEDPRFLS HKGFMEKAFV KSAIQNIKEK RFARGGSTIS MQLVKNVFLT RQKTVTRKIE | 540 |
EALIVWLIEN TRLVSKERMF EVYLNIIEWG PKIYGVKEAA EFYYAKEPSE LNLSESLYMA | 600 |
SIIPRPRRYQ MSFNQYGEMR SAARYFHRLI ADLMLQKGLI SDGARNTLSY SLSFPGRAHG | 660 |
SIFRAVRDTV RATQPSDSTQ FEPLNLIDLL GGNAAPDEGV NTTVPAPAEG TPVPKP | 716 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.