CAZyme3D

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Entry ID

Information for CAZyme ID: AIF14239.1

Basic Information

GenBank IDAIF14239.1
FamilyGT2
Sequence Length237
UniProt IDA0A075HE83(100,100)Download
Average pLDDT?84.92
CAZy50 ID174839
CAZy50 RepNo, AJA93127.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1456229
KingdomArchaea
PhylumNitrososphaerota
Class
Order
Family
Genus
Speciesuncultured marine thaumarchaeote KM3_66_E12

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKLAIVIPTY  NEAETIPSLI  KELFEKIKQL  VEKLDVLIID  DSSPDGTADI  VRELGDKYEK60
ITVIQRPKKM  GLGAAYKEGF  RYVLEKLDSE  LIIQMDADHS  HQPSEIPNML  EKIKNFDFLV120
ASRHVEGSDV  IGWGMWRKMT  HSIAGAIASV  CAKIEIKDST  SGFRMFRKKT  LEKVDFDKIR180
SDGFAFQIEV  LHQLKQLDMK  GLEVPTVFIN  RTEGSSKMGS  NEMMQFITMC  ISYIGRK237

Predicted 3D structure by AlphaFold2 with pLDDT = 84.92 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(5-174)

MKLAIVIPTY  NEAETIPSLI  KELFEKIKQL  VEKLDVLIID  DSSPDGTADI  VRELGDKYEK60
ITVIQRPKKM  GLGAAYKEGF  RYVLEKLDSE  LIIQMDADHS  HQPSEIPNML  EKIKNFDFLV120
ASRHVEGSDV  IGWGMWRKMT  HSIAGAIASV  CAKIEIKDST  SGFRMFRKKT  LEKVDFDKIR180
SDGFAFQIEV  LHQLKQLDMK  GLEVPTVFIN  RTEGSSKMGS  NEMMQFITMC  ISYIGRK237

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help