Information for CAZyme ID: AIE85514.1
Basic Information
| GenBank ID | AIE85514.1 |
| Family | GH78 |
| Sequence Length | 873 |
| UniProt ID | A0A068NVB4(100,100) |
| Average pLDDT? | 96.11 |
| CAZy50 ID | 11672 |
| CAZy50 Rep | No, BCM93530.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 661478 |
| Kingdom | Bacteria |
| Phylum | Armatimonadota |
| Class | Fimbriimonadia |
| Order | Fimbriimonadales |
| Family | Fimbriimonadaceae |
| Genus | Fimbriimonas |
| Species | Fimbriimonas ginsengisoli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTLLSLLALG AVAITPIHLK CEYQIDPLGI DATRPRLSWE LEAAGYGAKQ TAYQVRVATT | 60 |
| PLKLSKPDLW DSLQVTSGET INLEYGGRAL SSSERVSWSV RVWDEHGKAS PWSPPATWTM | 120 |
| GVLSPADWEA KWIAAAGAEK ETLELQKVFK VRPGLRRALA HVCGLGQYEL AINGDKVGEE | 180 |
| AFSPGWTNYR KTCLYDTRDI TRQLRRGDNI ANLLLGNGMY RVHGGRYTKF TGSFGPLCAI | 240 |
| GQIRLEYADG TTDLVGTDET WQCRPGPITF SSVYGGEDYD GRRVGVGDWE PVRIIKGPGG | 300 |
| ELHGSNRAAP PINAFDLLKP KSSKEISSTT DVYDMGQNAS LMPFLVASGP AGSIVRITPA | 360 |
| ELVKEDGTVD RSSVGGGQAY WQYTLAGKGK ESYFPHFFYH GCRYLQVERI AADNGDLPTV | 420 |
| QTVEAVVVHS ASPAVGTFDC SNQLFNRIHT LVRWAQRSNM VSVLTDCPHR ERLGWLEQYH | 480 |
| LNGPALRYEF DLARLFEKGM SDMADSQLAS GLIPDIAPEY TVFQGGFRDS PEWGSAYVLV | 540 |
| PWQQYLWTGD IGLLRRHYDG MKRYVAYLQG KSKNGIVSHG LGDWYDLGPG APGYAQLTPI | 600 |
| PLTATAFFYQ DTVILAQVAR RLELADDAVR LERQAAEIRS AFNREFYDPT KGYYATGSQT | 660 |
| ANAIPLVMGL AERENRSSVL GKIVADVRDH GDALTAGDVG YRYLLRALAD GDRSDVVFDM | 720 |
| NKGDEHPGYG YQLKMGATSL TEAWDAGRSS SQNHFMLGQI NEWFYHDLAG IAPSEVGPGF | 780 |
| RHIVFHPAVV GDIKWVDATF ASVRGMIESH WKVRGKQITY EVLVPPNCTA DIYVPSSDAK | 840 |
| SVRVVTGSAW ATSVAEGVYH VPAGRYVFTA DAP | 873 |
Predicted 3D structure by AlphaFold2 with pLDDT = 96.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM67(130-290)+GH78(325-833)
| MTLLSLLALG AVAITPIHLK CEYQIDPLGI DATRPRLSWE LEAAGYGAKQ TAYQVRVATT | 60 |
| PLKLSKPDLW DSLQVTSGET INLEYGGRAL SSSERVSWSV RVWDEHGKAS PWSPPATWTM | 120 |
| GVLSPADWEA KWIAAAGAEK ETLELQKVFK VRPGLRRALA HVCGLGQYEL AINGDKVGEE | 180 |
| AFSPGWTNYR KTCLYDTRDI TRQLRRGDNI ANLLLGNGMY RVHGGRYTKF TGSFGPLCAI | 240 |
| GQIRLEYADG TTDLVGTDET WQCRPGPITF SSVYGGEDYD GRRVGVGDWE PVRIIKGPGG | 300 |
| ELHGSNRAAP PINAFDLLKP KSSKEISSTT DVYDMGQNAS LMPFLVASGP AGSIVRITPA | 360 |
| ELVKEDGTVD RSSVGGGQAY WQYTLAGKGK ESYFPHFFYH GCRYLQVERI AADNGDLPTV | 420 |
| QTVEAVVVHS ASPAVGTFDC SNQLFNRIHT LVRWAQRSNM VSVLTDCPHR ERLGWLEQYH | 480 |
| LNGPALRYEF DLARLFEKGM SDMADSQLAS GLIPDIAPEY TVFQGGFRDS PEWGSAYVLV | 540 |
| PWQQYLWTGD IGLLRRHYDG MKRYVAYLQG KSKNGIVSHG LGDWYDLGPG APGYAQLTPI | 600 |
| PLTATAFFYQ DTVILAQVAR RLELADDAVR LERQAAEIRS AFNREFYDPT KGYYATGSQT | 660 |
| ANAIPLVMGL AERENRSSVL GKIVADVRDH GDALTAGDVG YRYLLRALAD GDRSDVVFDM | 720 |
| NKGDEHPGYG YQLKMGATSL TEAWDAGRSS SQNHFMLGQI NEWFYHDLAG IAPSEVGPGF | 780 |
| RHIVFHPAVV GDIKWVDATF ASVRGMIESH WKVRGKQITY EVLVPPNCTA DIYVPSSDAK | 840 |
| SVRVVTGSAW ATSVAEGVYH VPAGRYVFTA DAP | 873 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.