Information for CAZyme ID: AIA30284.1
Basic Information
GenBank ID | AIA30284.1 |
Family | GT2 |
Sequence Length | 714 |
UniProt ID | A0A059XP28(100,100)![]() |
Average pLDDT? | 89.98 |
CAZy50 ID | 4139 |
CAZy50 Rep | No, QQD71426.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1441628 |
Kingdom | Bacteria |
Phylum | Nitrospirota |
Class | Nitrospiria |
Order | Nitrospirales |
Family | Nitrospiraceae |
Genus | Leptospirillum |
Species | Leptospirillum ferriphilum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNRPWTAKTI RSVVLIPITF LIFFLATIPV PNWQTQLWLG TFLFLAALLL KIFLDGKRWV | 60 |
ILTLITLSFF STLRYAWWRT TETLGTGDPK VHWYEYPFIF LLFGAELYSW IILVLGYLQT | 120 |
AYPRGRKADP LPPDPESWPT VDILIPTYNE PLAVVRTTVL AALNMDWPPE KKKVFLLDDG | 180 |
NREEFATFAA QTGVVYVARP EHRHAKAGNV NYALARSDGK YVALFDCDHV PTRSFLQTTV | 240 |
GILEKSSRVA FVQTPHHFYS PDPYERNLNV FKKLPNEGEL FYGVIQDGND LWNASTFCGS | 300 |
CTVLRRKALN EIQGFAVDTV TEDAHTSIRL HRLGWESAYL NLPQAAGLAT PSLSAHIRQR | 360 |
IRWARGMIQI FRIENPLLAR GLTLAQKLCY LNGMLFFLSS LPRIIFLTAP LAYLYFGVRI | 420 |
FDADAYSIAS YAFPTIALSL LANAAINGRH RHSFWNQVYE TTLAPYIFLP TLLAMVRPDL | 480 |
GTFNVTAKEG RIEKEFYDRR IARPFIILWV LNLGGLISGI LRYTGGFGEI PTIVLTLAWT | 540 |
VHNLLIIGTT LAVGWERTQR RFRPRINVTY PVRLTAPDGQ YVYGETEDMS DDGVRIRLLK | 600 |
SASLRTGEDV RVEIPFLDRI HEFPAEIVGM DEFSIRLNFH PLTLEEEKNR VLLLYGRADA | 660 |
WVKLGLSEKE DSVLKSLWEV ALFAIIGQGR ALKGIFWSSG PKISRTPQTL GKVP | 714 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.98 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT2(142-312)
MNRPWTAKTI RSVVLIPITF LIFFLATIPV PNWQTQLWLG TFLFLAALLL KIFLDGKRWV | 60 |
ILTLITLSFF STLRYAWWRT TETLGTGDPK VHWYEYPFIF LLFGAELYSW IILVLGYLQT | 120 |
AYPRGRKADP LPPDPESWPT VDILIPTYNE PLAVVRTTVL AALNMDWPPE KKKVFLLDDG | 180 |
NREEFATFAA QTGVVYVARP EHRHAKAGNV NYALARSDGK YVALFDCDHV PTRSFLQTTV | 240 |
GILEKSSRVA FVQTPHHFYS PDPYERNLNV FKKLPNEGEL FYGVIQDGND LWNASTFCGS | 300 |
CTVLRRKALN EIQGFAVDTV TEDAHTSIRL HRLGWESAYL NLPQAAGLAT PSLSAHIRQR | 360 |
IRWARGMIQI FRIENPLLAR GLTLAQKLCY LNGMLFFLSS LPRIIFLTAP LAYLYFGVRI | 420 |
FDADAYSIAS YAFPTIALSL LANAAINGRH RHSFWNQVYE TTLAPYIFLP TLLAMVRPDL | 480 |
GTFNVTAKEG RIEKEFYDRR IARPFIILWV LNLGGLISGI LRYTGGFGEI PTIVLTLAWT | 540 |
VHNLLIIGTT LAVGWERTQR RFRPRINVTY PVRLTAPDGQ YVYGETEDMS DDGVRIRLLK | 600 |
SASLRTGEDV RVEIPFLDRI HEFPAEIVGM DEFSIRLNFH PLTLEEEKNR VLLLYGRADA | 660 |
WVKLGLSEKE DSVLKSLWEV ALFAIIGQGR ALKGIFWSSG PKISRTPQTL GKVP | 714 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.