Information for CAZyme ID: AHM63515.1
Basic Information
| GenBank ID | AHM63515.1 |
| Family | CBM88, GH74 |
| Sequence Length | 922 |
| UniProt ID | A0A0D3LNC9(100,100) |
| Average pLDDT? | 90.24 |
| CAZy50 ID | 17595 |
| CAZy50 Rep | No, QJB32550.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1257021 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flammeovirgaceae |
| Genus | |
| Species | Flammeovirgaceae bacterium 311 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIIKSITIQA KPLEQSRGII FRSHITCILC LCLLISPGLI RQLSAQNAAD YNWKNVAIGG | 60 |
| GGFVSAIIPS QTHQGLMYAR TDVGGAYRWD PDNNEWIPLL DWVSADETGY LGVESLAIDE | 120 |
| NNPGRIYMLV GISYFNGGKT AVLRSDDYGK TFSLTNVSSQ FKAHGNGMGR QTGEKLVVDP | 180 |
| NNSNILFTGT RWNGLFKSTD AGVSWSKVNS LDVNTTPNEN GISFVLIDPA SGTDGNASQT | 240 |
| IYVGVSRTGN NLYKSTDGGA TFSAVSGAPA TYMPHRAKLA TDGTLYITYG NGAGPHGHWA | 300 |
| LPEPMDKGQI WKFNTQASTW SNITPSGISR AFGGISIDPE NANRLVASTI NSYMQQDGAW | 360 |
| GDRIFLSTNG GSSWTDIIGR GFEMDPNSIT WVEGHSIHWA GSLEFDPFDT KKVWVTSGNG | 420 |
| IFMTENIEAN PSVWKFMVQG LEETVPLNLV SIPDGPVVSV IGDYDGFLHQ DVSQYAPIHN | 480 |
| PQMGTTTGLA YAAQNTNVLL RAGDKLYYST DMGVSWTESS SSGTKGHVAI SADGSTFLHT | 540 |
| PEGSSTTYRS TNRGSSWSAV TGLNVSGAVP VADPQNPDKF YAYNSGTGRM MVSTNGGASF | 600 |
| TAGGSAGSGG SKIIRTTPGI EGHLWVALDG GGLARSTNSG GSFSKVNGVS AASAVGLGKA | 660 |
| SPDSDYPTLY IWGTINGTNG LFRSTNQGAD WLQVNDDAHE YGGPGNGQFV VGDMNVFGRV | 720 |
| YMSTAGRGIV YGEPADVSNC PAATLTPYLK VNEGEWEQTL LAEVVAGDLI HFNPRTDNSE | 780 |
| EGSWSWTGPD GFSASTAEAT LNFLQPEQAG SYITTYTNAC GARTVRTYSI RLKEITAISS | 840 |
| PEIDQQVHIY PNPNTGGRFM VAVPASLQDA GIEVYDIMGK LVFRQAADPS GTTAVHQPLE | 900 |
| SGIYVVRIKN VRYQVNKRMV VQ | 922 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.24 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH74(100-211)+GH74(231-376)+CBM88(745-831)
| MIIKSITIQA KPLEQSRGII FRSHITCILC LCLLISPGLI RQLSAQNAAD YNWKNVAIGG | 60 |
| GGFVSAIIPS QTHQGLMYAR TDVGGAYRWD PDNNEWIPLL DWVSADETGY LGVESLAIDE | 120 |
| NNPGRIYMLV GISYFNGGKT AVLRSDDYGK TFSLTNVSSQ FKAHGNGMGR QTGEKLVVDP | 180 |
| NNSNILFTGT RWNGLFKSTD AGVSWSKVNS LDVNTTPNEN GISFVLIDPA SGTDGNASQT | 240 |
| IYVGVSRTGN NLYKSTDGGA TFSAVSGAPA TYMPHRAKLA TDGTLYITYG NGAGPHGHWA | 300 |
| LPEPMDKGQI WKFNTQASTW SNITPSGISR AFGGISIDPE NANRLVASTI NSYMQQDGAW | 360 |
| GDRIFLSTNG GSSWTDIIGR GFEMDPNSIT WVEGHSIHWA GSLEFDPFDT KKVWVTSGNG | 420 |
| IFMTENIEAN PSVWKFMVQG LEETVPLNLV SIPDGPVVSV IGDYDGFLHQ DVSQYAPIHN | 480 |
| PQMGTTTGLA YAAQNTNVLL RAGDKLYYST DMGVSWTESS SSGTKGHVAI SADGSTFLHT | 540 |
| PEGSSTTYRS TNRGSSWSAV TGLNVSGAVP VADPQNPDKF YAYNSGTGRM MVSTNGGASF | 600 |
| TAGGSAGSGG SKIIRTTPGI EGHLWVALDG GGLARSTNSG GSFSKVNGVS AASAVGLGKA | 660 |
| SPDSDYPTLY IWGTINGTNG LFRSTNQGAD WLQVNDDAHE YGGPGNGQFV VGDMNVFGRV | 720 |
| YMSTAGRGIV YGEPADVSNC PAATLTPYLK VNEGEWEQTL LAEVVAGDLI HFNPRTDNSE | 780 |
| EGSWSWTGPD GFSASTAEAT LNFLQPEQAG SYITTYTNAC GARTVRTYSI RLKEITAISS | 840 |
| PEIDQQVHIY PNPNTGGRFM VAVPASLQDA GIEVYDIMGK LVFRQAADPS GTTAVHQPLE | 900 |
| SGIYVVRIKN VRYQVNKRMV VQ | 922 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.