Information for CAZyme ID: AHG65820.1
Basic Information
| GenBank ID | AHG65820.1 |
| Family | GT107 |
| Sequence Length | 674 |
| UniProt ID | W0PJU0(100,100) |
| Average pLDDT? | 88.93 |
| CAZy50 ID | 33902 |
| CAZy50 Rep | No, CAQ71702.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1247726 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Advenella |
| Species | Advenella mimigardefordensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTGRPQAMVD RKVTSYVVSP MDIGLWRNRS LPAFLDAPLK ISALGTPGDA IRLGWGRKKS | 60 |
| GLRAVRLAAS AGERFCLLED GFLRSVGLGV DEPPLSVLFD HQGIYYDASS PSWLEYLIAQ | 120 |
| QLDADETIRA QALISLWREQ RVSKYNHLPE FAGSLPARYV LLADQTFGDA SLRYGQASPA | 180 |
| DFVVMLECAL RQHADCTVLI KIHPDVFAGH KKGHFDLAAL QDNPRVRIIA DNVHPVRLIE | 240 |
| QAQAVYTVTS QIGFEALLWG KPVFTFGMPF YAGYGLTTDA QPAPPRRQPV SLEQLVHAAL | 300 |
| VGYARYLDPE TGSLCEPERL MEWMGLQRRM RNRFVSPVYA PNFSRWKKPI VQRFFQGSEV | 360 |
| RFLEKAGDFP GEGTLAVWGR PADLSQFADK RVFLEDGFLR SVGLGADLVQ PLSWVIDRTG | 420 |
| IYYDSSRASD LETILQTAVF DDALRQRAAV LRERIVAANL TKYNVGSGRW QRPAGAARVI | 480 |
| LVPGQVETDA SIKYGSPVVP RNMELLRAVR KANPDAYVVY KPHPDVVAGL RDAGKNEQQA | 540 |
| LDWCNEVVVD YPIGELFAVV DEVHVLTSLA GFEALLRGRK VVTLGQPFYA GWGLTQDMNP | 600 |
| VARRDRTLSL DELVAGVLIL YPSYVSRRSG RYTTPESALD ELLDWKAAGV SAMPPWRKAV | 660 |
| RPVLGWIARL RGKR | 674 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.93 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT107(45-322)+GT107(303-659)
| MTGRPQAMVD RKVTSYVVSP MDIGLWRNRS LPAFLDAPLK ISALGTPGDA IRLGWGRKKS | 60 |
| GLRAVRLAAS AGERFCLLED GFLRSVGLGV DEPPLSVLFD HQGIYYDASS PSWLEYLIAQ | 120 |
| QLDADETIRA QALISLWREQ RVSKYNHLPE FAGSLPARYV LLADQTFGDA SLRYGQASPA | 180 |
| DFVVMLECAL RQHADCTVLI KIHPDVFAGH KKGHFDLAAL QDNPRVRIIA DNVHPVRLIE | 240 |
| QAQAVYTVTS QIGFEALLWG KPVFTFGMPF YAGYGLTTDA QPAPPRRQPV SLEQLVHAAL | 300 |
| VGYARYLDPE TGSLCEPERL MEWMGLQRRM RNRFVSPVYA PNFSRWKKPI VQRFFQGSEV | 360 |
| RFLEKAGDFP GEGTLAVWGR PADLSQFADK RVFLEDGFLR SVGLGADLVQ PLSWVIDRTG | 420 |
| IYYDSSRASD LETILQTAVF DDALRQRAAV LRERIVAANL TKYNVGSGRW QRPAGAARVI | 480 |
| LVPGQVETDA SIKYGSPVVP RNMELLRAVR KANPDAYVVY KPHPDVVAGL RDAGKNEQQA | 540 |
| LDWCNEVVVD YPIGELFAVV DEVHVLTSLA GFEALLRGRK VVTLGQPFYA GWGLTQDMNP | 600 |
| VARRDRTLSL DELVAGVLIL YPSYVSRRSG RYTTPESALD ELLDWKAAGV SAMPPWRKAV | 660 |
| RPVLGWIARL RGKR | 674 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.