Information for CAZyme ID: AHD10689.1
Basic Information
GenBank ID | AHD10689.1 |
Family | CE4 |
Sequence Length | 471 |
UniProt ID | V9WLG6(100,100)![]() |
Average pLDDT? | 93.66 |
CAZy50 ID | 70697 |
CAZy50 Rep | No, UJX46959.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1423144 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Alphaproteobacteria |
Order | Rhodobacterales |
Family | Roseobacteraceae |
Genus | Phaeobacter |
Species | Phaeobacter gallaeciensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNRYPRNMIG YGATPPDAAW PGKAKVAVQF VLNFEEGGEN SILHGDAGSE AFLSDIAGAA | 60 |
SWPGQRHWNM ESIYDYGARA GFWRLHRMFT AADIPVTIYG VASALARAPE QVAAMKAADW | 120 |
EIASHGLKWV EHKDMAEEEE RAAIAEAIRL HTEVVGTRPR GWYTGRCSEN TVRLVAEEGG | 180 |
FDYVSDTYDD DLPYWLEVGA RDQLIIPYTL EANDMRFATA PGYITGEQFY QYLKDAFDLL | 240 |
YTEGEAGAPK MMSVGLHCRL IGRPGKAAGL KRFIDYIQGF DGVWCPRRID IADHWAKTHP | 300 |
HQRRELPSQM TRARFVEAYG GIFEHSPWIA DRAHDLELGP AHDRAAGLHN ALCRMFRSAS | 360 |
EEERLGVLTA HPDLAGKLAA AKRLTAESTN EQASVGLDAL TDAERTRFTQ LNTAYVEKHG | 420 |
FPFIIAVRDH DKASILAAFE RRIDHDRASE FAEACRQVER IAEFRLKDLL P | 471 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.66 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CE4(75-186)
MNRYPRNMIG YGATPPDAAW PGKAKVAVQF VLNFEEGGEN SILHGDAGSE AFLSDIAGAA | 60 |
SWPGQRHWNM ESIYDYGARA GFWRLHRMFT AADIPVTIYG VASALARAPE QVAAMKAADW | 120 |
EIASHGLKWV EHKDMAEEEE RAAIAEAIRL HTEVVGTRPR GWYTGRCSEN TVRLVAEEGG | 180 |
FDYVSDTYDD DLPYWLEVGA RDQLIIPYTL EANDMRFATA PGYITGEQFY QYLKDAFDLL | 240 |
YTEGEAGAPK MMSVGLHCRL IGRPGKAAGL KRFIDYIQGF DGVWCPRRID IADHWAKTHP | 300 |
HQRRELPSQM TRARFVEAYG GIFEHSPWIA DRAHDLELGP AHDRAAGLHN ALCRMFRSAS | 360 |
EEERLGVLTA HPDLAGKLAA AKRLTAESTN EQASVGLDAL TDAERTRFTQ LNTAYVEKHG | 420 |
FPFIIAVRDH DKASILAAFE RRIDHDRASE FAEACRQVER IAEFRLKDLL P | 471 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.