Information for CAZyme ID: AHD10341.1
Basic Information
| GenBank ID | AHD10341.1 |
| Family | GT107 |
| Sequence Length | 676 |
| UniProt ID | V9WH24(100,100) |
| Average pLDDT? | 89.48 |
| CAZy50 ID | 35483 |
| CAZy50 Rep | No, UWQ05704.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1423144 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter gallaeciensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTGQYPTTKA GGARSRLFYY NAGFLRQKRL RRILSLAGYD LRLGKPTADD LVAVWGNADT | 60 |
| AHRGQAVAEA QGCELLRVED AFLRSIHPGR AGEPPLGLLL DRSGLHFDPA TPSDLEQLLA | 120 |
| SHPLDDSALM RRARRAIARL QDAHLSKYNA YSPQAPVPDP GYVLVIDQAR GDASVRASTP | 180 |
| FEGTDHARFQ EMLYYAQDEH PGARTIIKSH PEDRAGHRPG YYSAADAQGR VEILDAPVSP | 240 |
| WALLEGAIAV YTVSSQMGFE AILCGHKPRI FGQPFYAGWG LSEDEFPVTR RQRRLTRAQL | 300 |
| FAAAMILYPK WYSPHHDRLC ELEEVIDALE AETRAWQQDR AGWIASGMRL WKRHPLQNFF | 360 |
| GRYRRLRFSN SAKTAKSSGR NWMIWAGRTS TGQSPGAHRV EDGFLRSRGL GADLIPPLSL | 420 |
| VVDRQGIYYD PHQPSDLEDL IAARTMLTPE QQQRAEDLTQ RLVQDSLSKY NLGGTVPDLP | 480 |
| EGHRVLVVGQ VADDASVRLG CEKIATNADL LRAARKANPG AVLIYKPHPD VEAGLRDGSI | 540 |
| AAEQLADVVV PDSDPMALLD MVHEVWTMTS LMGFEALLRG VKVTTVGAPF YAGWGLTTDL | 600 |
| GAVPVARRRA RPALMGLVHA ALIDYPRYVD PVSGLPCQVE LVVERLAKGD IPAPGTANRT | 660 |
| LAKLQGLLAT YAHLWR | 676 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.48 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT107(45-334)+GT107(311-672)
| MTGQYPTTKA GGARSRLFYY NAGFLRQKRL RRILSLAGYD LRLGKPTADD LVAVWGNADT | 60 |
| AHRGQAVAEA QGCELLRVED AFLRSIHPGR AGEPPLGLLL DRSGLHFDPA TPSDLEQLLA | 120 |
| SHPLDDSALM RRARRAIARL QDAHLSKYNA YSPQAPVPDP GYVLVIDQAR GDASVRASTP | 180 |
| FEGTDHARFQ EMLYYAQDEH PGARTIIKSH PEDRAGHRPG YYSAADAQGR VEILDAPVSP | 240 |
| WALLEGAIAV YTVSSQMGFE AILCGHKPRI FGQPFYAGWG LSEDEFPVTR RQRRLTRAQL | 300 |
| FAAAMILYPK WYSPHHDRLC ELEEVIDALE AETRAWQQDR AGWIASGMRL WKRHPLQNFF | 360 |
| GRYRRLRFSN SAKTAKSSGR NWMIWAGRTS TGQSPGAHRV EDGFLRSRGL GADLIPPLSL | 420 |
| VVDRQGIYYD PHQPSDLEDL IAARTMLTPE QQQRAEDLTQ RLVQDSLSKY NLGGTVPDLP | 480 |
| EGHRVLVVGQ VADDASVRLG CEKIATNADL LRAARKANPG AVLIYKPHPD VEAGLRDGSI | 540 |
| AAEQLADVVV PDSDPMALLD MVHEVWTMTS LMGFEALLRG VKVTTVGAPF YAGWGLTTDL | 600 |
| GAVPVARRRA RPALMGLVHA ALIDYPRYVD PVSGLPCQVE LVVERLAKGD IPAPGTANRT | 660 |
| LAKLQGLLAT YAHLWR | 676 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.