Information for CAZyme ID: AHB71437.1
Basic Information
GenBank ID | AHB71437.1 |
Family | CBM34, GH13_21 |
Sequence Length | 605 |
UniProt ID | V5U2R0(100,100)![]() |
Average pLDDT? | 93.56 |
CAZy50 ID | 45846 |
CAZy50 Rep | No, AMO50316.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 413503 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Enterobacterales |
Family | Enterobacteriaceae |
Genus | Cronobacter |
Species | Cronobacter malonaticus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLNAWHLPVA PFIHRQGEKL LITLWLAGDA LPEKVMLRYE RDNEETPFEM KRLSAAPHPQ | 60 |
VSAWQASIPL GDGQPRRRYG FKLLWGDRQQ WFSPLGLSEF PPARLALFAI DAPDDGPQWV | 120 |
QDQVFYQIFP DRFARSTTRG AQQDNIYFHH AQGHDIILRD WHEPVSAEAG GSTFYGGDLD | 180 |
GICEKLPYLK KLGVTALYLN PIFSAPSVHK YDTADYRHVD PQFGGDEALL RLREKTRETG | 240 |
MRLILDGVFN HTGDTHPWFD RQNHGTDGAC HHPDSPTRNW YTFAGDGHAF CWLGYDSLPK | 300 |
LDFAEPGVVD EIYAGEESVV KHWLKAPWSI DGWRLDVVHM LGESGGAKAN LRHVEGITRA | 360 |
AKAVNPQAFV FGEHFGDARQ WLQNDVEDAA MNYRGFTTPV WSFLAGVDHG LEPQQLDAAD | 420 |
CARWMEEYRA ALSHQQQLRM FNQLDSHDTA RFKTVAKGDP ARIRAAAVWL FCWPGVPCVF | 480 |
YGDEVGVEGG NDPFCRQPFP WDKTQQDGEL LALYQRLARL RHRNRALRSG ACQVVYAKSD | 540 |
VLVFTRVFQQ ERVLVALNRG AACEITLPFS PLLDDRAWTR EEGGGALEGQ TLRLAAGAAV | 600 |
ILHSR | 605 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.56 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM34(5-107)+GH13_21(177-490)
MLNAWHLPVA PFIHRQGEKL LITLWLAGDA LPEKVMLRYE RDNEETPFEM KRLSAAPHPQ | 60 |
VSAWQASIPL GDGQPRRRYG FKLLWGDRQQ WFSPLGLSEF PPARLALFAI DAPDDGPQWV | 120 |
QDQVFYQIFP DRFARSTTRG AQQDNIYFHH AQGHDIILRD WHEPVSAEAG GSTFYGGDLD | 180 |
GICEKLPYLK KLGVTALYLN PIFSAPSVHK YDTADYRHVD PQFGGDEALL RLREKTRETG | 240 |
MRLILDGVFN HTGDTHPWFD RQNHGTDGAC HHPDSPTRNW YTFAGDGHAF CWLGYDSLPK | 300 |
LDFAEPGVVD EIYAGEESVV KHWLKAPWSI DGWRLDVVHM LGESGGAKAN LRHVEGITRA | 360 |
AKAVNPQAFV FGEHFGDARQ WLQNDVEDAA MNYRGFTTPV WSFLAGVDHG LEPQQLDAAD | 420 |
CARWMEEYRA ALSHQQQLRM FNQLDSHDTA RFKTVAKGDP ARIRAAAVWL FCWPGVPCVF | 480 |
YGDEVGVEGG NDPFCRQPFP WDKTQQDGEL LALYQRLARL RHRNRALRSG ACQVVYAKSD | 540 |
VLVFTRVFQQ ERVLVALNRG AACEITLPFS PLLDDRAWTR EEGGGALEGQ TLRLAAGAAV | 600 |
ILHSR | 605 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.