CAZyme3D

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Entry ID

Information for CAZyme ID: AHA97803.1

Basic Information

GenBank IDAHA97803.1
FamilyGT101
Sequence Length670
UniProt IDA0A7D9N7Q5(100,100)Download
Average pLDDT?86.72
CAZy50 ID42290
CAZy50 RepNo, QTQ39651.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1408186
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus johnsonii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKTIVLCANY  DKLSQIETTL  KSLFTNNKDI  RVYIINSDIS  HEWFVNINSF  LNNINSKIID60
KKIDLNRFNK  LPELKEDNRS  KIEYGKFLIP  ELVNEDKVLY  LGNNTIIDKN  LDKLFATDVN120
DKPLYATVDF  VHPDKFNTNV  MLINNIYWRN  NNIGNQFLEL  AKNYDFIDDQ  TMINNGFGIN180
IGKLPEIYNY  QISFGNSNFE  LTNSYLYYED  TVDKPAIIQY  ATDYRLIREN  SPKRLNKKWW240
NYYSSEWSEV  VARVIPNRIK  KNFDKEALIF  LNYAENHGAE  ELIKQLPNIH  FNIVSKRDLY300
AGLDVLTQNE  NVTLYPQILN  YHLKSIIEKT  DLCFDIGYGD  KDTYIETVLN  MLDIPTFAFS360
DTQYSEKGNN  YYVFESMGDL  INQVNKLPAN  NSRKTFDDVF  DISVKSIDET  LDEIIENKKS420
VVRIGDGELD  LIYGEDIRYQ  HSNSKLAKVL  KDCILNNHNS  KILTCLPDIF  TNLDRYNEMR480
GYYALGVLPK  FSDLFKEIEK  SKYSYGSTFM  SRMYISFRDK  SKSQHYVDKL  RDIWKDKDIL540
IVEGEYTRSG  VGNDLFENAK  SIQRIICPAA  DAFNQVDEIE  EAIRNNAQNK  LILLMLGPTA600
KVIVNDLQDL  DNQILDIGHI  DTEYEWFKMG  AKYVVPIGKN  KHMAEVADRY  LGEEDNPQYQ660
KEIILKIKKK  670

Predicted 3D structure by AlphaFold2 with pLDDT = 86.72 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT8(3-223)+GT101(421-645)

MKTIVLCANY  DKLSQIETTL  KSLFTNNKDI  RVYIINSDIS  HEWFVNINSF  LNNINSKIID60
KKIDLNRFNK  LPELKEDNRS  KIEYGKFLIP  ELVNEDKVLY  LGNNTIIDKN  LDKLFATDVN120
DKPLYATVDF  VHPDKFNTNV  MLINNIYWRN  NNIGNQFLEL  AKNYDFIDDQ  TMINNGFGIN180
IGKLPEIYNY  QISFGNSNFE  LTNSYLYYED  TVDKPAIIQY  ATDYRLIREN  SPKRLNKKWW240
NYYSSEWSEV  VARVIPNRIK  KNFDKEALIF  LNYAENHGAE  ELIKQLPNIH  FNIVSKRDLY300
AGLDVLTQNE  NVTLYPQILN  YHLKSIIEKT  DLCFDIGYGD  KDTYIETVLN  MLDIPTFAFS360
DTQYSEKGNN  YYVFESMGDL  INQVNKLPAN  NSRKTFDDVF  DISVKSIDET  LDEIIENKKS420
VVRIGDGELD  LIYGEDIRYQ  HSNSKLAKVL  KDCILNNHNS  KILTCLPDIF  TNLDRYNEMR480
GYYALGVLPK  FSDLFKEIEK  SKYSYGSTFM  SRMYISFRDK  SKSQHYVDKL  RDIWKDKDIL540
IVEGEYTRSG  VGNDLFENAK  SIQRIICPAA  DAFNQVDEIE  EAIRNNAQNK  LILLMLGPTA600
KVIVNDLQDL  DNQILDIGHI  DTEYEWFKMG  AKYVVPIGKN  KHMAEVADRY  LGEEDNPQYQ660
KEIILKIKKK  670

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help