Information for CAZyme ID: AGZ38995.1
Basic Information
| GenBank ID | AGZ38995.1 |
| Family | GH87 |
| Sequence Length | 668 |
| UniProt ID | U5VTD0(100,100) |
| Average pLDDT? | 94.44 |
| CAZy50 ID | 16933 |
| CAZy50 Rep | No, BCB86199.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1246995 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micromonosporales |
| Family | Micromonosporaceae |
| Genus | Actinoplanes |
| Species | Actinoplanes friuliensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTISARWPAL ATASVVGLGL AVGAGVPASA APQAPVVTRA GLDPALVAGR GATVDFAEQE | 60 |
| AENTKHNGAV IGPDRAAYSL AAEASGRTAV KLTPGQYVEF TLPKAANAVN VRYSIPDAPT | 120 |
| GGGITAPLDV AVNGKHTKKM TLTSEYAYLY NQYPFSNDPT AGLLHPDWWI AECACVPAAT | 180 |
| TPTPEISKPF RPMHFYDEQR LLLGKTYRAG DRIRLTASSG AAWTVIDLLD SQLVGLPHVN | 240 |
| LVASNVLLFG ADPTGKRDSA AAFDKAIAFA KKAKLKVYVP PGTYQVNRHI IVDNVTIEGA | 300 |
| GSWYTIIKGK EVALSEPAPD GSVHTGVGFY GKDAADGGSR NVHLKGFTIQ GDVRERIDTD | 360 |
| QVNGIGGALS DSTIDGLYLR HTKVGMWFDG PMTNLKITNN TIVDQIADAL NFHTGVTNSV | 420 |
| VRNNFIRNTG DDGLAMWAEK ITNTGNTFDH NTVQTPTLAN GIAIYGGTDN TVSNNLVADP | 480 |
| IREGSGIHAG SRFGAEPFAG ALTIKNNTVV RAGTLELNWN IGLGAIWFYA LDKTIDADIQ | 540 |
| VTGDHYLDST YNAIMLVSDW GVKDLYSIEG VKFKDLRIDG TGTSVVSARV AGSASFSNVD | 600 |
| ARNVGAVGVN NCGSFGFKPT GSEFSLTDLG GNDGGGTTGP WLAAWELPNT ITCDDRPPVV | 660 |
| APPAPTTW | 668 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.44 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH87(46-611)
| MTISARWPAL ATASVVGLGL AVGAGVPASA APQAPVVTRA GLDPALVAGR GATVDFAEQE | 60 |
| AENTKHNGAV IGPDRAAYSL AAEASGRTAV KLTPGQYVEF TLPKAANAVN VRYSIPDAPT | 120 |
| GGGITAPLDV AVNGKHTKKM TLTSEYAYLY NQYPFSNDPT AGLLHPDWWI AECACVPAAT | 180 |
| TPTPEISKPF RPMHFYDEQR LLLGKTYRAG DRIRLTASSG AAWTVIDLLD SQLVGLPHVN | 240 |
| LVASNVLLFG ADPTGKRDSA AAFDKAIAFA KKAKLKVYVP PGTYQVNRHI IVDNVTIEGA | 300 |
| GSWYTIIKGK EVALSEPAPD GSVHTGVGFY GKDAADGGSR NVHLKGFTIQ GDVRERIDTD | 360 |
| QVNGIGGALS DSTIDGLYLR HTKVGMWFDG PMTNLKITNN TIVDQIADAL NFHTGVTNSV | 420 |
| VRNNFIRNTG DDGLAMWAEK ITNTGNTFDH NTVQTPTLAN GIAIYGGTDN TVSNNLVADP | 480 |
| IREGSGIHAG SRFGAEPFAG ALTIKNNTVV RAGTLELNWN IGLGAIWFYA LDKTIDADIQ | 540 |
| VTGDHYLDST YNAIMLVSDW GVKDLYSIEG VKFKDLRIDG TGTSVVSARV AGSASFSNVD | 600 |
| ARNVGAVGVN NCGSFGFKPT GSEFSLTDLG GNDGGGTTGP WLAAWELPNT ITCDDRPPVV | 660 |
| APPAPTTW | 668 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.