Information for CAZyme ID: AGY59900.1
Basic Information
GenBank ID | AGY59900.1 |
Family | CBM20, GH13_2 |
Sequence Length | 623 |
UniProt ID | U5QQE2(100,100)![]() |
Average pLDDT? | 93.66 |
CAZy50 ID | 41712 |
CAZy50 Rep | No, AFY79807.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1183438 |
Kingdom | Bacteria |
Phylum | Cyanobacteriota |
Class | Cyanophyceae |
Order | Gloeobacterales |
Family | Gloeobacteraceae |
Genus | Gloeobacter |
Species | Gloeobacter kilaueensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MISQSQIPPD TDAAKAAAEQ EEEFINLLQL SDIEFRGETI YFIVVDRFFN GDPGNDEGPD | 60 |
PSLYDPERRD WGKYWGGDLE GIIAKLDYLQ KLGVTAIWVT PLFEQIEAMS WEAAPIHGYW | 120 |
TRDFKRINAR WVSGPEEVRL FERNDTTFDR LIKALHERGM KLILDVVCNH SSPDAAGIKG | 180 |
QLFDDGKLIA DFNDDKDFWY HHYGEVSDWN DEWQVQNCEL AGLATFNENN IHYRNYIKGA | 240 |
IKLWLDKGVD ALRVDTVKHM PIWFWQEFNS DIQAHKPDVF VFGEWIYSHP LSERSVEFAN | 300 |
FSGMSMLDFG LCIAIRQALA QADPSGFHLI EDVFREDWRY RGATELVTFI DNHDMPRFQS | 360 |
LGADDETLRL AVDLIMLSRG IPCLYYGTEQ YLHDDTDGGN DPYNRPMMAL WDERTPLFRD | 420 |
LHRLSAVRRR NPAVKWGGQW TRYINPDIYA FVRKYRDARC FVALNRSIET VLVEDVLTEL | 480 |
PDGTHRCVLS GEDYTIKAGR LEKLELAPRQ VVVLSVTGKP VRGRQVARIQ LNGIRTRPGE | 540 |
IVAIVGDCPE LGNWDRDQAV ALEYINENTW LGEVAIKQSA DKIISYKYVV LREQGQPIYE | 600 |
NRTSRRRFAP NGTIAKWRDI WEE | 623 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.66 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_2(76-392)+CBM20(534-606)
MISQSQIPPD TDAAKAAAEQ EEEFINLLQL SDIEFRGETI YFIVVDRFFN GDPGNDEGPD | 60 |
PSLYDPERRD WGKYWGGDLE GIIAKLDYLQ KLGVTAIWVT PLFEQIEAMS WEAAPIHGYW | 120 |
TRDFKRINAR WVSGPEEVRL FERNDTTFDR LIKALHERGM KLILDVVCNH SSPDAAGIKG | 180 |
QLFDDGKLIA DFNDDKDFWY HHYGEVSDWN DEWQVQNCEL AGLATFNENN IHYRNYIKGA | 240 |
IKLWLDKGVD ALRVDTVKHM PIWFWQEFNS DIQAHKPDVF VFGEWIYSHP LSERSVEFAN | 300 |
FSGMSMLDFG LCIAIRQALA QADPSGFHLI EDVFREDWRY RGATELVTFI DNHDMPRFQS | 360 |
LGADDETLRL AVDLIMLSRG IPCLYYGTEQ YLHDDTDGGN DPYNRPMMAL WDERTPLFRD | 420 |
LHRLSAVRRR NPAVKWGGQW TRYINPDIYA FVRKYRDARC FVALNRSIET VLVEDVLTEL | 480 |
PDGTHRCVLS GEDYTIKAGR LEKLELAPRQ VVVLSVTGKP VRGRQVARIQ LNGIRTRPGE | 540 |
IVAIVGDCPE LGNWDRDQAV ALEYINENTW LGEVAIKQSA DKIISYKYVV LREQGQPIYE | 600 |
NRTSRRRFAP NGTIAKWRDI WEE | 623 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.