CAZyme3D

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Entry ID

Information for CAZyme ID: AGX05959.1

Basic Information

GenBank IDAGX05959.1
FamilyGT35
Sequence Length801
UniProt IDU5LDM9(100,100)Download
Average pLDDT?93.85
CAZy50 ID22895
CAZy50 RepNo, QDR82152.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1367477
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus infantis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFSDKEEFKE  VFLTRLEMTS  GKSFPDSTKR  DQYQTLGHMV  REYVSMNWIN  TNERSRMIKQ60
KQVYYLSIEF  LLGRLLRNNL  LNLGIHKVVE  EGLQDLGIEL  GDLEESEPDA  GLGNGGLGRL120
AACFLDSLAS  LDLPGHGCGI  RYKHGLFEQK  IVDGYQVELP  EQWLRHGNVW  EIRKADSAVE180
IPFWGRVECS  EEEGRLVFRH  LPGETVTAVP  YDMPVAGYQT  ETVNTLRLWS  AEPSPFPQHK240
NIMQYKRETE  LISEFLYPDD  THDEGKILRL  KQQYFLVSAS  IRSIIESFKK  QHGNMKDFNQ300
FISIHINDTH  PVLAIPELMR  ILVDEEKMAW  EEAWDITVST  ISYTNHTTLS  EALEKWPIRL360
FQPLLPRIFM  IAEEINKRFC  LKLEEKYPGD  WERIRSMAII  SDGEVKMAHL  ALAGSHSVNG420
VAALHTEILK  HREMKQFYEL  YPEKFNNKTN  GITHRRWLLN  SNPRLAGLIS  EAIGPGWIKE480
PQRLGEMAKF  AEDSSMLLEL  ELIKEENKQR  LARRVKQQTG  LSIDTSSIFD  IQVKRLHAYK540
RQLLNVLHIM  HMYNRIKEGD  SHIQPRTFIF  GAKASPGYYY  AKKIIKLINT  VAEKVNNDPA600
ANKLIKVVFL  ENYRVSLAEE  IFPAADISEQ  ISTASKEASG  TGNMKFMMNG  ALTVGTLDGA660
NVEILERVGE  ENIFIFGLAA  EEVLRYQQNG  EYRSMDYYHL  DKRISTIINQ  LTNGFFPYAG720
DEFESIADSL  LMHNDQYFVL  RDFDSYAAIQ  KQAANAYGDR  LGWQRKSLMN  IAASGHFSSD780
RTIREYAEEI  WHIQPAASHS  K801

Predicted 3D structure by AlphaFold2 with pLDDT = 93.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(93-794)

MFSDKEEFKE  VFLTRLEMTS  GKSFPDSTKR  DQYQTLGHMV  REYVSMNWIN  TNERSRMIKQ60
KQVYYLSIEF  LLGRLLRNNL  LNLGIHKVVE  EGLQDLGIEL  GDLEESEPDA  GLGNGGLGRL120
AACFLDSLAS  LDLPGHGCGI  RYKHGLFEQK  IVDGYQVELP  EQWLRHGNVW  EIRKADSAVE180
IPFWGRVECS  EEEGRLVFRH  LPGETVTAVP  YDMPVAGYQT  ETVNTLRLWS  AEPSPFPQHK240
NIMQYKRETE  LISEFLYPDD  THDEGKILRL  KQQYFLVSAS  IRSIIESFKK  QHGNMKDFNQ300
FISIHINDTH  PVLAIPELMR  ILVDEEKMAW  EEAWDITVST  ISYTNHTTLS  EALEKWPIRL360
FQPLLPRIFM  IAEEINKRFC  LKLEEKYPGD  WERIRSMAII  SDGEVKMAHL  ALAGSHSVNG420
VAALHTEILK  HREMKQFYEL  YPEKFNNKTN  GITHRRWLLN  SNPRLAGLIS  EAIGPGWIKE480
PQRLGEMAKF  AEDSSMLLEL  ELIKEENKQR  LARRVKQQTG  LSIDTSSIFD  IQVKRLHAYK540
RQLLNVLHIM  HMYNRIKEGD  SHIQPRTFIF  GAKASPGYYY  AKKIIKLINT  VAEKVNNDPA600
ANKLIKVVFL  ENYRVSLAEE  IFPAADISEQ  ISTASKEASG  TGNMKFMMNG  ALTVGTLDGA660
NVEILERVGE  ENIFIFGLAA  EEVLRYQQNG  EYRSMDYYHL  DKRISTIINQ  LTNGFFPYAG720
DEFESIADSL  LMHNDQYFVL  RDFDSYAAIQ  KQAANAYGDR  LGWQRKSLMN  IAASGHFSSD780
RTIREYAEEI  WHIQPAASHS  K801

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help