Information for CAZyme ID: AGT36602.1
Basic Information
GenBank ID | AGT36602.1 |
Family | CBM20 |
Sequence Length | 678 |
UniProt ID | S5ZB27(100,100)![]() |
Average pLDDT? | 83.64 |
CAZy50 ID | 40371 |
CAZy50 Rep | No, QFF91344.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 9031 |
Kingdom | Eukaryota |
Phylum | Chordata |
Class | Aves |
Order | Galliformes |
Family | Phasianidae |
Genus | Gallus |
Species | Gallus gallus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTSSQVTFEV RGPSVPGEVF AICGSCSALG SWNPQAAVVL QTDDCELWKA TIELPRGVPV | 60 |
KYRYFKGYFL KPKTIDGPCE VIVHTWETHL QPRSITPLEN EMTIDDGYFG IHNGIETVDA | 120 |
GWLTCQTEIR LRLHYSEKSP VMISKKKFKT SRFRVKLTLE GLEKDDDDEE GQEKTSPTVP | 180 |
QKMANTVEFS LISNNEYKCR HSQPDCGYAL QSDRWLEYTI QTMEPDNLEL IFDFFEEDLS | 240 |
EKVVQDDEHP GHVGSACLLS STIAESGKSA GILTLAIMGR NPRKTIGKVR VDYLIIKPIQ | 300 |
GYTCDMKASY AKYWKPRTTL DVGHRGAGNS TTTAKLAKVQ ENTIASLRNA ASHGAAYVEF | 360 |
DVHLSKDHVP IVYHDLTCCM AMKKKLDTEP LELFEIAVKE LTFDQLQLLK LAHVTALKVK | 420 |
DHNASFKEEE NSAYETQPFP SLQRVLESVS EDVGFNIEIK WICQQKDGQW DGNLSTYFDM | 480 |
NLFLDIILKT VLMNAGRRGI VFSSFNADIC TMVRHKQNKY PVLFLTQGES KLYPELMDLR | 540 |
SRTTPIAITF AQFENLLGVN VHSEDLLRNP LYIKRAISKG LVIFSWGDDA NDPDNRKKLK | 600 |
EYGVHGLIYD RIYDSNPEQP NIFQVEQLER LKKELPELKS CVCPTVSHFK SISPCKCHHS | 660 |
CLEEKAVDNL QSVQMQKD | 678 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.64 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM20(5-67)
MTSSQVTFEV RGPSVPGEVF AICGSCSALG SWNPQAAVVL QTDDCELWKA TIELPRGVPV | 60 |
KYRYFKGYFL KPKTIDGPCE VIVHTWETHL QPRSITPLEN EMTIDDGYFG IHNGIETVDA | 120 |
GWLTCQTEIR LRLHYSEKSP VMISKKKFKT SRFRVKLTLE GLEKDDDDEE GQEKTSPTVP | 180 |
QKMANTVEFS LISNNEYKCR HSQPDCGYAL QSDRWLEYTI QTMEPDNLEL IFDFFEEDLS | 240 |
EKVVQDDEHP GHVGSACLLS STIAESGKSA GILTLAIMGR NPRKTIGKVR VDYLIIKPIQ | 300 |
GYTCDMKASY AKYWKPRTTL DVGHRGAGNS TTTAKLAKVQ ENTIASLRNA ASHGAAYVEF | 360 |
DVHLSKDHVP IVYHDLTCCM AMKKKLDTEP LELFEIAVKE LTFDQLQLLK LAHVTALKVK | 420 |
DHNASFKEEE NSAYETQPFP SLQRVLESVS EDVGFNIEIK WICQQKDGQW DGNLSTYFDM | 480 |
NLFLDIILKT VLMNAGRRGI VFSSFNADIC TMVRHKQNKY PVLFLTQGES KLYPELMDLR | 540 |
SRTTPIAITF AQFENLLGVN VHSEDLLRNP LYIKRAISKG LVIFSWGDDA NDPDNRKKLK | 600 |
EYGVHGLIYD RIYDSNPEQP NIFQVEQLER LKKELPELKS CVCPTVSHFK SISPCKCHHS | 660 |
CLEEKAVDNL QSVQMQKD | 678 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.