CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AGO12860.1

Basic Information

GenBank IDAGO12860.1
FamilyCBM43, GH72
Sequence Length535
UniProt IDR9XJX9(100,100)Download
Average pLDDT?85.06
CAZy50 ID23236
CAZy50 RepNo, CBX98350.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID566037
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilySaccharomycetaceae
GenusEremothecium
Species[Ashbya] aceris (nom. inval.)

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLFNKLAAVA  ALGSLVTAAT  ASSGEVPEIV  IKGNKFFYSN  NGTQFFMRGV  AYQTDGHDGS60
GSSKYVDPLA  DIKTVSRDIP  YLQQLRTNVI  RVYALDGKKD  HQETMKALAD  AGIYVIADLS120
EPALSINRNT  PEWSVKLFDR  YKEVVDEMQK  YTNVLGFFAG  NEVTNEVNNT  EASAFVKAAV180
RDTKAYIKQK  GYRAIPVGYA  ANDDSKFREE  ITNYFACGSN  EERADFYGFN  VYSWCGDSSF240
EKSGYSDRTE  EFSKLPIPAF  FSEYGCNEVK  PRKFTDVAAL  YGDKMTDVWS  GGIVYMYFEE300
ENKYGLVTVK  GDKVSTLSDF  SYYSAQIAKA  SPTGVNSASY  TPSITSMACP  TIADNWKAAS360
SLPPMPNKDA  CKCMADSLSC  VISDDVDEEN  YGDLFGYLCG  SDAKLCKGII  ANATEGEYGA420
FSYCSGKEKL  SYLLNEYYKA  QGKSEKACSF  SGSASIRKPT  QASTCEAVLS  SASAGLPPQA480
DGSGSARGAS  STGASASPKS  NMGAVNAQYN  MFNVLMSSVA  TLSVFMGVGL  SSSKV535

Predicted 3D structure by AlphaFold2 with pLDDT = 85.06 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH72(25-329)+CBM43(379-465)

MLFNKLAAVA  ALGSLVTAAT  ASSGEVPEIV  IKGNKFFYSN  NGTQFFMRGV  AYQTDGHDGS60
GSSKYVDPLA  DIKTVSRDIP  YLQQLRTNVI  RVYALDGKKD  HQETMKALAD  AGIYVIADLS120
EPALSINRNT  PEWSVKLFDR  YKEVVDEMQK  YTNVLGFFAG  NEVTNEVNNT  EASAFVKAAV180
RDTKAYIKQK  GYRAIPVGYA  ANDDSKFREE  ITNYFACGSN  EERADFYGFN  VYSWCGDSSF240
EKSGYSDRTE  EFSKLPIPAF  FSEYGCNEVK  PRKFTDVAAL  YGDKMTDVWS  GGIVYMYFEE300
ENKYGLVTVK  GDKVSTLSDF  SYYSAQIAKA  SPTGVNSASY  TPSITSMACP  TIADNWKAAS360
SLPPMPNKDA  CKCMADSLSC  VISDDVDEEN  YGDLFGYLCG  SDAKLCKGII  ANATEGEYGA420
FSYCSGKEKL  SYLLNEYYKA  QGKSEKACSF  SGSASIRKPT  QASTCEAVLS  SASAGLPPQA480
DGSGSARGAS  STGASASPKS  NMGAVNAQYN  MFNVLMSSVA  TLSVFMGVGL  SSSKV535

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help