Information for CAZyme ID: AGC78214.1
Basic Information
| GenBank ID | AGC78214.1 |
| Family | GH3 |
| Sequence Length | 977 |
| UniProt ID | L7WDP4(100,100) |
| Average pLDDT? | 93.98 |
| CAZy50 ID | 13525 |
| CAZy50 Rep | No, AOR29278.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 592029 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Nonlabens |
| Species | Nonlabens dokdonensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKFKYALRLF VVVAFAKAYT SQAQLNSNTP LISNDSIAQK QWVDSVYNSL SQKEKIGQLF | 60 |
| MVDLFSNKGK AHVDKVRKLV TDHKIGGIIF SKGGPVQQAY LTNELQEKSK TKMLIAMDAE | 120 |
| WGLAMRLDST YAFPWNMTLG ATPGKQSSYE VGKRIGEHCK RLGVHINFAP DVDINTNPLN | 180 |
| PIIGNRSFGE DMNNVTDKAS AFMNGMQSTG TLACAKHFPG HGDTDTDSHK TLPTVDFSAE | 240 |
| RIDSVELYPY KRLIDKGMAS VMVAHLNIPS LEPRPGYPTS ISEKVVTDLL KTKLGFNGLI | 300 |
| FTDALNMKGA SNFSAPGEID LQAFKAGNDV LLISEDVPKS IEKIQAAIEA GELTEERLEH | 360 |
| SVKKILMSKY VVGLHNYEPV QIPQLVEDLN TEKDDVVYEN AISAAVTVLK NKSDILPIKN | 420 |
| LETKKIAYVE LGDDSGTVFL NELNKYTQVD QVKSTQLDGL LKNLEKYNTV IIGLHRSNEN | 480 |
| PWKSYKLKEK ELTWLYEISR KHDVIFDGFV RPYMLEQLKT IENLEGIIMS YQNSEWSQKV | 540 |
| SAQIIFGARD AVGTLPVSSG LFKVNEGIKV ENIKRLSYGS NPSSVGFDSK MVSKIDSIAM | 600 |
| HTINGKGAPG IQILVARRGK VVLDKTYGYH TYDKKDAVKS NDVYDIASVT KILATLPLVM | 660 |
| ELEENNVISL DDAISKLDTD LKSTNKEQIT VKQMLSHYGR LKPWIPFYVY TLDSITNKPS | 720 |
| PLFYSSGSKS SFNIPVADRL FANATVQDRM YNQIKESELR DKLEYKYSDL PYYIMKRYIE | 780 |
| KHYNKNLDEL TQNHFYSSLG MNRTGYLPLN KFPKKEIIPT EDDKTFRNQL IHGYVHDQGA | 840 |
| AMQGGIGGHA GIFSTTNDVA KMMQMYLQGG TYGGRQYLKQ ETIDKFNTCY YCENDVRRGV | 900 |
| GFDKPQLEDS GPTCGCVGRS SFGHSGFTGA YTWADPEEEI VYVFLSNRVH PDADNRFIIQ | 960 |
| ENIRTNIQQI IYDSIID | 977 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.98 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(106-332)
| MKFKYALRLF VVVAFAKAYT SQAQLNSNTP LISNDSIAQK QWVDSVYNSL SQKEKIGQLF | 60 |
| MVDLFSNKGK AHVDKVRKLV TDHKIGGIIF SKGGPVQQAY LTNELQEKSK TKMLIAMDAE | 120 |
| WGLAMRLDST YAFPWNMTLG ATPGKQSSYE VGKRIGEHCK RLGVHINFAP DVDINTNPLN | 180 |
| PIIGNRSFGE DMNNVTDKAS AFMNGMQSTG TLACAKHFPG HGDTDTDSHK TLPTVDFSAE | 240 |
| RIDSVELYPY KRLIDKGMAS VMVAHLNIPS LEPRPGYPTS ISEKVVTDLL KTKLGFNGLI | 300 |
| FTDALNMKGA SNFSAPGEID LQAFKAGNDV LLISEDVPKS IEKIQAAIEA GELTEERLEH | 360 |
| SVKKILMSKY VVGLHNYEPV QIPQLVEDLN TEKDDVVYEN AISAAVTVLK NKSDILPIKN | 420 |
| LETKKIAYVE LGDDSGTVFL NELNKYTQVD QVKSTQLDGL LKNLEKYNTV IIGLHRSNEN | 480 |
| PWKSYKLKEK ELTWLYEISR KHDVIFDGFV RPYMLEQLKT IENLEGIIMS YQNSEWSQKV | 540 |
| SAQIIFGARD AVGTLPVSSG LFKVNEGIKV ENIKRLSYGS NPSSVGFDSK MVSKIDSIAM | 600 |
| HTINGKGAPG IQILVARRGK VVLDKTYGYH TYDKKDAVKS NDVYDIASVT KILATLPLVM | 660 |
| ELEENNVISL DDAISKLDTD LKSTNKEQIT VKQMLSHYGR LKPWIPFYVY TLDSITNKPS | 720 |
| PLFYSSGSKS SFNIPVADRL FANATVQDRM YNQIKESELR DKLEYKYSDL PYYIMKRYIE | 780 |
| KHYNKNLDEL TQNHFYSSLG MNRTGYLPLN KFPKKEIIPT EDDKTFRNQL IHGYVHDQGA | 840 |
| AMQGGIGGHA GIFSTTNDVA KMMQMYLQGG TYGGRQYLKQ ETIDKFNTCY YCENDVRRGV | 900 |
| GFDKPQLEDS GPTCGCVGRS SFGHSGFTGA YTWADPEEEI VYVFLSNRVH PDADNRFIIQ | 960 |
| ENIRTNIQQI IYDSIID | 977 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.