Information for CAZyme ID: AFZ05485.1
Basic Information
| GenBank ID | AFZ05485.1 |
| Family | GT5 |
| Sequence Length | 491 |
| UniProt ID | K9VE19(100,100) |
| Average pLDDT? | 95.74 |
| CAZy50 ID | 23437 |
| CAZy50 Rep | No, CCE25163.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 179408 |
| Kingdom | Bacteria |
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Oscillatoriales |
| Family | Oscillatoriaceae |
| Genus | Oscillatoria |
| Species | Oscillatoria nigro-viridis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MYIVQIASEC APVIKAGGLG DVVYGLSREL QNSGHCVEII LPKYDCMRYD HIWGLHEAYR | 60 |
| DLAVPWYGGE ILCDVLCGWV HGQLCFFIEP RSQDRFFNRG CYYGCDDDNM RFAFFSKAAL | 120 |
| EFLLRSNKRP DVIHCHDWQT GLVPVLLFEI YKYNWMENQR VCYTIHNFKH QGMGGSDILN | 180 |
| ATGLNREDYY FEYDRLRDNF NPFAINFMKG GIVYSNFVTT VSPHHAWEAH HGEFGYGLGH | 240 |
| TLHLYQDKFR GVLNGIDYDV WNPESDRYLP AHYTQDDLAG KAKTKKALRD RLLLRDADKP | 300 |
| IITFIGRLDD QKGVHLVHHA IYYSLSKGAQ FVLLGSATEA GINAHFQHER YFLNDNPDCH | 360 |
| LELGFNEELS HLIYAGGDII VVPSNYEPCG LTQMIGLRYG TVPVVRGVGG LVNTVFDRDY | 420 |
| DTRHLPEERN GYVFYQTDYY ALESALDRAI GLWYDYHDEF EKLMLQGMNC DNSWKYPAKD | 480 |
| YVEIYELIRH K | 491 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.74 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT5(3-486)
| MYIVQIASEC APVIKAGGLG DVVYGLSREL QNSGHCVEII LPKYDCMRYD HIWGLHEAYR | 60 |
| DLAVPWYGGE ILCDVLCGWV HGQLCFFIEP RSQDRFFNRG CYYGCDDDNM RFAFFSKAAL | 120 |
| EFLLRSNKRP DVIHCHDWQT GLVPVLLFEI YKYNWMENQR VCYTIHNFKH QGMGGSDILN | 180 |
| ATGLNREDYY FEYDRLRDNF NPFAINFMKG GIVYSNFVTT VSPHHAWEAH HGEFGYGLGH | 240 |
| TLHLYQDKFR GVLNGIDYDV WNPESDRYLP AHYTQDDLAG KAKTKKALRD RLLLRDADKP | 300 |
| IITFIGRLDD QKGVHLVHHA IYYSLSKGAQ FVLLGSATEA GINAHFQHER YFLNDNPDCH | 360 |
| LELGFNEELS HLIYAGGDII VVPSNYEPCG LTQMIGLRYG TVPVVRGVGG LVNTVFDRDY | 420 |
| DTRHLPEERN GYVFYQTDYY ALESALDRAI GLWYDYHDEF EKLMLQGMNC DNSWKYPAKD | 480 |
| YVEIYELIRH K | 491 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.