Information for CAZyme ID: AFV90342.1
Basic Information
GenBank ID | AFV90342.1 |
Family | GH2 |
Sequence Length | 624 |
UniProt ID | K7S6Y9(100,100)![]() |
Average pLDDT? | 92.35 |
CAZy50 ID | 41899 |
CAZy50 Rep | No, UYG17188.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1171373 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Propionibacteriales |
Family | Propionibacteriaceae |
Genus | Acidipropionibacterium |
Species | Acidipropionibacterium acidipropionici |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MMNDALAHDL QPVGITPGDE PVPRPEYPRP GAARQNWMNL NGAWQFEIDR GDSGRERGVP | 60 |
GRDLAGSIIV PFAPESRLSG VEDTDFMAAV WYRRTVTIPE SWGSADDDVH VLVHFEAVDH | 120 |
DATVWADGVE VARHRGGFTP FTADLHGVCE PGGTVTLVVR ARDPRKGAQA RGKQSTEYAN | 180 |
DGCFYTRTTG IWQTVWAEPV PSTRMGRPHV VPDLAAAGFR VSVPLTANRA GWTVRAELTS | 240 |
PRGDRVARAV TRADLDREPA LWLPIPPDQA LPWAPDHPDL YGLHLELRDE GGHIVDRLAS | 300 |
YAGLRSVSVR DRQLLLNGEP IFQRLVLDQG YWPQSLMTAP DDQALRADIE LGMRAGFNGA | 360 |
RLHQKVFEER YLYHADRLGY LVWGEFPDWG ANTGGPRGDH QHPTSTFAAQ WAEELERDRS | 420 |
HPSIVGWCPL NETFQELTDR FTDLDDVMAA MVSAARLADG TRPVLDSSGY SHRDPRTDVW | 480 |
DAHLYEQDPA RFAELVSGLA EGRPFANPGD GTTWSLPYTG QPYFISEFGG IWWDPEAAAQ | 540 |
ARGDDQYESW GYGPRVASEA DFHDRFAGLT GVLLADPQMF GYCYTQLTDV FQERNGIYRF | 600 |
DRSEKLDVGA VRAAQLRPAA YEEE | 624 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.35 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(33-482)
MMNDALAHDL QPVGITPGDE PVPRPEYPRP GAARQNWMNL NGAWQFEIDR GDSGRERGVP | 60 |
GRDLAGSIIV PFAPESRLSG VEDTDFMAAV WYRRTVTIPE SWGSADDDVH VLVHFEAVDH | 120 |
DATVWADGVE VARHRGGFTP FTADLHGVCE PGGTVTLVVR ARDPRKGAQA RGKQSTEYAN | 180 |
DGCFYTRTTG IWQTVWAEPV PSTRMGRPHV VPDLAAAGFR VSVPLTANRA GWTVRAELTS | 240 |
PRGDRVARAV TRADLDREPA LWLPIPPDQA LPWAPDHPDL YGLHLELRDE GGHIVDRLAS | 300 |
YAGLRSVSVR DRQLLLNGEP IFQRLVLDQG YWPQSLMTAP DDQALRADIE LGMRAGFNGA | 360 |
RLHQKVFEER YLYHADRLGY LVWGEFPDWG ANTGGPRGDH QHPTSTFAAQ WAEELERDRS | 420 |
HPSIVGWCPL NETFQELTDR FTDLDDVMAA MVSAARLADG TRPVLDSSGY SHRDPRTDVW | 480 |
DAHLYEQDPA RFAELVSGLA EGRPFANPGD GTTWSLPYTG QPYFISEFGG IWWDPEAAAQ | 540 |
ARGDDQYESW GYGPRVASEA DFHDRFAGLT GVLLADPQMF GYCYTQLTDV FQERNGIYRF | 600 |
DRSEKLDVGA VRAAQLRPAA YEEE | 624 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.