CAZyme3D

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Entry ID

Information for CAZyme ID: AFR91617.1

Basic Information

GenBank IDAFR91617.1
FamilyGH37
Sequence Length266
UniProt IDJ9VIY1(100,100)Download
Average pLDDT?94.05
CAZy50 ID51435
CAZy50 RepNo, QRC76221.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1116483
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderLepidoptera
FamilyNymphalidae
GenusHeliconius
SpeciesHeliconius cydno

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

FYTDIKSAAE  SGWDFSSRWF  IGNDGNNKGN  LSTIHASKII  PVDLNAIFAN  ALQNMAYFQA60
LIGQPRKGAH  WAYLAKQWRN  TIKDVLWNED  DGIWYDWNLQ  NEEHRKYFYP  SNIAPLWMGV120
VDKSLIKKNA  PKILNWLKGS  HGLDYPGGVP  TSLIRSGEQW  DFPNAWPPLV  SVTVNALEAL180
ETEESLQMAF  EVAQNWVRSC  HAGFESNKQM  FEKYDAEVPG  RVGGGGEYTV  QTGFGWSNGV240
ILEFLAKYGR  KMTAKDNADY  SVIGVE266

Predicted 3D structure by AlphaFold2 with pLDDT = 94.05 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH37(1-248)

FYTDIKSAAE  SGWDFSSRWF  IGNDGNNKGN  LSTIHASKII  PVDLNAIFAN  ALQNMAYFQA60
LIGQPRKGAH  WAYLAKQWRN  TIKDVLWNED  DGIWYDWNLQ  NEEHRKYFYP  SNIAPLWMGV120
VDKSLIKKNA  PKILNWLKGS  HGLDYPGGVP  TSLIRSGEQW  DFPNAWPPLV  SVTVNALEAL180
ETEESLQMAF  EVAQNWVRSC  HAGFESNKQM  FEKYDAEVPG  RVGGGGEYTV  QTGFGWSNGV240
ILEFLAKYGR  KMTAKDNADY  SVIGVE266

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help