Information for CAZyme ID: AFO98073.1
Basic Information
GenBank ID | AFO98073.1 |
Family | CBM48, GH13_8 |
Sequence Length | 685 |
UniProt ID | V9KJA3(100,100)![]() |
Average pLDDT? | 95.99 |
CAZy50 ID | 937 |
CAZy50 Rep | No, CAG7908015.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 7868 |
Kingdom | Eukaryota |
Phylum | Chordata |
Class | Chondrichthyes |
Order | Chimaeriformes |
Family | Callorhinchidae |
Genus | Callorhinchus |
Species | Callorhinchus milii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPVGAVAAEP QLEPLLQIDP NLKPFSEELR RRYKKFHTLL KSIEENEGSL DQFSKAYETF | 60 |
GIHSQGNTIY CKEWAPGAEA VFLVGDFNQW NTSSHPYKKL EFGKWELRIP PDARGFSPIP | 120 |
HKSKLKVLIH NKKSELLYRI SPWAKHVVPS EKNITYDWLH WDPAQPYLCI QPRPKRPRSL | 180 |
RIYEAHVGIA SPEGKIASYT NFTRNMLPRI KDLGYNAIQM MAIMEHAYYA SFGYQITSFF | 240 |
AASSRYGTPD ELKQLVDTAH SMGIVVLLDV VHSHASTNTD DGLNEFDGTD SCFFHSGSRG | 300 |
THTLWDSRLF NYSHWEVLRF LLANLRWWME EYHFDGFRFD GVTSMLYHHH GLAVGFSGDY | 360 |
SEYFGLQVDD ESVVYLMLSN HLLHSLYPDC ITIAEDVSGM PTLCRPISEG GAGFDYRLAM | 420 |
AIPDKWIQML KELKDEDWNM GNIVFTLSNR RYGEKCIAYA ESHDQALVGD KTLAFWLMDA | 480 |
EMYTNMSVLS PLTLKIDRGL QLHKMIRLIT HGLGGEGYLN FIGNEFGHPE WLDFPRKGNN | 540 |
ESYHYARRQF NLVDDANLRY KYLYTFDRAM NKTEEKYAWL ASQPAYVSEK HESNKVIAFE | 600 |
RANLLFIFNF NSQKSFTDYR VGVERPGKYK IVLDTDASEF GGHTRLDNKT EFFTESMPHN | 660 |
NRASSVMVYL PSRTAIILAN VDDSN | 685 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.99 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(60-146)+GH13_8(231-524)
MPVGAVAAEP QLEPLLQIDP NLKPFSEELR RRYKKFHTLL KSIEENEGSL DQFSKAYETF | 60 |
GIHSQGNTIY CKEWAPGAEA VFLVGDFNQW NTSSHPYKKL EFGKWELRIP PDARGFSPIP | 120 |
HKSKLKVLIH NKKSELLYRI SPWAKHVVPS EKNITYDWLH WDPAQPYLCI QPRPKRPRSL | 180 |
RIYEAHVGIA SPEGKIASYT NFTRNMLPRI KDLGYNAIQM MAIMEHAYYA SFGYQITSFF | 240 |
AASSRYGTPD ELKQLVDTAH SMGIVVLLDV VHSHASTNTD DGLNEFDGTD SCFFHSGSRG | 300 |
THTLWDSRLF NYSHWEVLRF LLANLRWWME EYHFDGFRFD GVTSMLYHHH GLAVGFSGDY | 360 |
SEYFGLQVDD ESVVYLMLSN HLLHSLYPDC ITIAEDVSGM PTLCRPISEG GAGFDYRLAM | 420 |
AIPDKWIQML KELKDEDWNM GNIVFTLSNR RYGEKCIAYA ESHDQALVGD KTLAFWLMDA | 480 |
EMYTNMSVLS PLTLKIDRGL QLHKMIRLIT HGLGGEGYLN FIGNEFGHPE WLDFPRKGNN | 540 |
ESYHYARRQF NLVDDANLRY KYLYTFDRAM NKTEEKYAWL ASQPAYVSEK HESNKVIAFE | 600 |
RANLLFIFNF NSQKSFTDYR VGVERPGKYK IVLDTDASEF GGHTRLDNKT EFFTESMPHN | 660 |
NRASSVMVYL PSRTAIILAN VDDSN | 685 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.