Information for CAZyme ID: AFL78598.1
Basic Information
GenBank ID | AFL78598.1 |
Family | GH163 |
Sequence Length | 731 |
UniProt ID | I3YNN0(100,100)![]() |
Average pLDDT? | 93.55 |
CAZy50 ID | 31766 |
CAZy50 Rep | No, QYR10515.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 679935 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Bacteroidia |
Order | Bacteroidales |
Family | Rikenellaceae |
Genus | Alistipes |
Species | Alistipes finegoldii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRLFRWIFVV SLLLVSSGVR AQTRLTRNGK PAARIVVAQQ TAADLTAAQL LQRFVRESTG | 60 |
ATLPLLHDVT PRKGDILIGA SDTAGLAEDG FRLRTQDGVL RISSGGDKGA VYGVMTLLER | 120 |
YLGLDYFAAG VYDLDRNPTV TLPAMDFAEN PAFRYRQSQG YGMAQDSVYR LALRLEEPRD | 180 |
IFAGGLWVHT FNSLLPASVY GAEHPEYYSF INGERRPGRA SQWCLTNDEL FELVAAKVDS | 240 |
IFRANPGMNI ISISQNDSNF TYCRCEECEK VNRYEGAPSG NYIRFLNKLA ERFPDKEFST | 300 |
LAYLFTMQPP KHVKPLPNVN IMLCDIDCDR EVPLTDNASG REFIEAMEGW AALSDNIFVW | 360 |
DYGINFDNMV APFPNFPILK PNIGLFRRNH ATMHFSQIGG SYGGDFSEMR TYVVAKLMWN | 420 |
PDQDTDSLML RFMRGYYGPA APYIYQYEKL LEGALLAGGQ RLWIYDSPVS HKDGMLNAAC | 480 |
RKRYGELFDC AERAVAGDSV LLRRVRLTRL PLMYSNLEIA RTTADKDLGA VVSELDAFEK | 540 |
YVTQFGVKTL NERNNSPQEY CRLYRERYLP AENSNLALGA RIVWIDAPAE KYRASGEKTL | 600 |
TDGLFGGASF VESWTGWEGK DGAFVVDLGR DVAFSTVETD FLHQLGQWIL LPRSVRYSVS | 660 |
SDNADWTPFG QVEFPEDQSV PVKFVPAAVT AAQPVRARYV KVEIEGVKTC PPWHYGVGCP | 720 |
CWFFLDEVTV K | 731 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.55 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH163(194-447)+CBM32(613-706)
0 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.