Information for CAZyme ID: AFK65332.1
Basic Information
GenBank ID | AFK65332.1 |
Family | CBM61, GH53 |
Sequence Length | 1234 |
UniProt ID | I0BGN8(100,100)![]() |
Average pLDDT? | 83.17 |
CAZy50 ID | 7147 |
CAZy50 Rep | No, AEI40749.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 997761 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus mucilaginosus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRFVKKSTAL LLVAAMALTW VPLGARAAEQ ESVIRINPIE GLSPDFIKGS DVSMLSQIKE | 60 |
SGGRYHDGGV EKDALQILKD HGTNWVRLRI WNNPVDPDGN PLGGGNNDLA RTVETAVYAK | 120 |
ELGLKVLLDF HYSDFWADPG KQFKPAAWEG LSGAELEQAV YDYTDSVIRE LKAQDAMPDM | 180 |
VQIGNETNGG MIWPDGKTWQ QSAGEEIGGY DGFANLLKAG IRAVEDNDPE DQTRIMLHLA | 240 |
DGGDNDLYRR VFDALTLRGV NFDIIGLSFY PYWHGTLEEL KHNMNDISTR YDKDVIVVET | 300 |
AYAHTLENGD GFTNIFGPAE ESAGGYKATV QGQAQAVRDI MNAVHEVPGG RGLGVFYWEQ | 360 |
DWIPVEGAGW KTGEGNGWDN QAMFDFEGNA LPSLDVYNLV SAPLEGEPYA AELEYVQPVT | 420 |
LDITVGGELQ LPAAVKGEFS DDSIRLLPVD WEAVSPEDLT KPGTLRIAGT IEGASLQAEA | 480 |
VVTVEGTRNY VTNAGFEAGD FSGWTLSGDT EALDAEKSSA PAGNAYSGDY SLHYYLDRPY | 540 |
TFKVEQKVTG LPDGTYTAAV RTQGGGGEKS LKLFAVNAAG DKLTADIVNT AWHEWKHIVI | 600 |
PNITVTGGEL TLGVEADANN GSWGSIDEFE LYTDHSQVTL SAPEEVEPGS EFSVGVGVDG | 660 |
LVNVIGSQDL QLSYDRELFQ YVGAESSEAG TVVAATYDAD AGTVHLVTQH AEGKAANTES | 720 |
LQVKFKAQHI EREGTIGVTS AEWTALSSGK KITPSALGSV TVSVYGAANH EPGGGTGGSN | 780 |
GGGNGGDGNG GGTGGNHGGG NSGGTDGNHG GGTDGNTGGG TDNGSSNDDD DDNSGNGNGN | 840 |
NGSGNGNSSN GNAAGKPAYE AATGTATAKL SADEAAKRLK AEGGQVLKLE IPAVEGAKAY | 900 |
AQELPAALLQ EQPDLRIELV TPFGSVSLPG SMLAGSKGLG SGPVTVSIRT VDPSELKDEA | 960 |
LKGKLGGKPV IDLTVLANGQ PVAWNNPDAP VTVSIPYKPN AAEAQHPEYL TVWYLNANGE | 1020 |
AEAVPTSHWN AKTGLLTFQT THFSAYAAAY DKRSFSDLSH VGWAAQAVEA LAAKGVIQGT | 1080 |
SDTEFAPDAP VTRAEFLQML VRAAGLTASF DSNFSDVART DYFYDAAGIA KKLGVAGGRE | 1140 |
NGVFAPSERI TREDLMVLTV RALEKAGRWK NTGGSGLEAF SDASTVAGYA ADAAASLVQA | 1200 |
GVINGRGGVL APKEATTRAE AAVILYRALQ VSEQ | 1234 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.17 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH53(47-396)+CBM61(489-631)+SLH(1055-1096)+SLH(1114-1154)+SLH(1180-1221)
MRFVKKSTAL LLVAAMALTW VPLGARAAEQ ESVIRINPIE GLSPDFIKGS DVSMLSQIKE | 60 |
SGGRYHDGGV EKDALQILKD HGTNWVRLRI WNNPVDPDGN PLGGGNNDLA RTVETAVYAK | 120 |
ELGLKVLLDF HYSDFWADPG KQFKPAAWEG LSGAELEQAV YDYTDSVIRE LKAQDAMPDM | 180 |
VQIGNETNGG MIWPDGKTWQ QSAGEEIGGY DGFANLLKAG IRAVEDNDPE DQTRIMLHLA | 240 |
DGGDNDLYRR VFDALTLRGV NFDIIGLSFY PYWHGTLEEL KHNMNDISTR YDKDVIVVET | 300 |
AYAHTLENGD GFTNIFGPAE ESAGGYKATV QGQAQAVRDI MNAVHEVPGG RGLGVFYWEQ | 360 |
DWIPVEGAGW KTGEGNGWDN QAMFDFEGNA LPSLDVYNLV SAPLEGEPYA AELEYVQPVT | 420 |
LDITVGGELQ LPAAVKGEFS DDSIRLLPVD WEAVSPEDLT KPGTLRIAGT IEGASLQAEA | 480 |
VVTVEGTRNY VTNAGFEAGD FSGWTLSGDT EALDAEKSSA PAGNAYSGDY SLHYYLDRPY | 540 |
TFKVEQKVTG LPDGTYTAAV RTQGGGGEKS LKLFAVNAAG DKLTADIVNT AWHEWKHIVI | 600 |
PNITVTGGEL TLGVEADANN GSWGSIDEFE LYTDHSQVTL SAPEEVEPGS EFSVGVGVDG | 660 |
LVNVIGSQDL QLSYDRELFQ YVGAESSEAG TVVAATYDAD AGTVHLVTQH AEGKAANTES | 720 |
LQVKFKAQHI EREGTIGVTS AEWTALSSGK KITPSALGSV TVSVYGAANH EPGGGTGGSN | 780 |
GGGNGGDGNG GGTGGNHGGG NSGGTDGNHG GGTDGNTGGG TDNGSSNDDD DDNSGNGNGN | 840 |
NGSGNGNSSN GNAAGKPAYE AATGTATAKL SADEAAKRLK AEGGQVLKLE IPAVEGAKAY | 900 |
AQELPAALLQ EQPDLRIELV TPFGSVSLPG SMLAGSKGLG SGPVTVSIRT VDPSELKDEA | 960 |
LKGKLGGKPV IDLTVLANGQ PVAWNNPDAP VTVSIPYKPN AAEAQHPEYL TVWYLNANGE | 1020 |
AEAVPTSHWN AKTGLLTFQT THFSAYAAAY DKRSFSDLSH VGWAAQAVEA LAAKGVIQGT | 1080 |
SDTEFAPDAP VTRAEFLQML VRAAGLTASF DSNFSDVART DYFYDAAGIA KKLGVAGGRE | 1140 |
NGVFAPSERI TREDLMVLTV RALEKAGRWK NTGGSGLEAF SDASTVAGYA ADAAASLVQA | 1200 |
GVINGRGGVL APKEATTRAE AAVILYRALQ VSEQ | 1234 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.