Information for CAZyme ID: AFK65197.1
Basic Information
GenBank ID | AFK65197.1 |
Family | GH50 |
Sequence Length | 1143 |
UniProt ID | I0BT02(100,100)![]() |
Average pLDDT? | 88.84 |
CAZy50 ID | 9136 |
CAZy50 Rep | No, AFC33186.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 997761 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus mucilaginosus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MMDKIRVRTG LLLSAILIGL PALPPPAASA ETRPPAVIDE LQSWDVAYKR SSTLSLLSNM | 60 |
TNTDDTTRVQ RSAAYNEYLI YQAPYGFGSF TVYTYVNELY KPYDHLQFFT SSDGVNYQEV | 120 |
IAQQYEDGGH LNLLVYEASD LPAGARYLKI RYSGGVILKS PSIGKVVLGS PASVQASVYS | 180 |
GIAALGTQVA LSTPTAGASI YYTTDGTDPK TSSARKLYTA PLDIPASEVL DLAAHAEITD | 240 |
GMGRKIGGRI SRFNYAAMGP EDIRVAAAAD TMVDEAQPDK AFGSAQNLGV RHSRVKDAYF | 300 |
TFSLQNFNAL SDTAKLLLHG YASDSTREPA SLQLYPAAGG WDEASVTYRS RPALLSDTPL | 360 |
AVKPLAYGLP GWMQFDVTEY AREQKALGRT SITLALRNGT QGTTQIASRE TGDRAPFLKI | 420 |
TSGGGLSPSG VVDGMDSFAL LYKRSNILIS TNDTPYFAGD GSRFTRLSTQ PGFIVYRLES | 480 |
GVRSFMVSSY FYTGIPIVHN RLYTSADGVT YKELAATVYP SGSAAGNWQQ YIYEASSLPE | 540 |
GTQYVKVEMS GDSKSWTPQL SRASLNQHTS SVQVNTAPVD SSLKVELSTP SAPAQIFFRT | 600 |
DGEGGFKTYP GPITLSGYHT IEAYAVKNGL EASPVRHFKI NATGQAQIDR YGQVISTDFA | 660 |
GKVRSDEELA ADAAADEAYY ASLQAPANRD AYGGLKGSSW TYGIPKTGFF DIRRAGGRKV | 720 |
MTTPEGNVYF SLGMNGITPN ETYTKVTGRE HNFEWIPQFT GEYRAAFLGS QDNFSYYLAN | 780 |
KFRKSGRIPS TVSFYTEAVD RLKKWGFNGA GAWTPVQVVR GQSFPYTVML PMASVTAGKL | 840 |
DGLSLFDIFA PGAAEQMDKA FAAALPALKD DPMLIGYFID NEYDYHKFHT AVPKLKGHTA | 900 |
MKRKLVDMLR SQYVTMEAFN ASWATPYTSF DQLYDAELTV RPGQAYLDMD AFFRLYLDTF | 960 |
YGTVSRLFRQ YDGNHLLLGD RWITMTAANV RVRGLLAEAS GKYLDAISIN HYSAQLDKDM | 1020 |
LNDVHTKSGG KAILLSEFSF GTAEQGLKPI VPGSAASQHE RQLRYRTYVE GAAALGYVVG | 1080 |
AHWFDYVDQA AAGRYWEGYG GERYNSGLVN VADRPYKQLL EGIMATHSKI YDVVMGKTGP | 1140 |
FQE | 1143 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH50(647-1131)
MMDKIRVRTG LLLSAILIGL PALPPPAASA ETRPPAVIDE LQSWDVAYKR SSTLSLLSNM | 60 |
TNTDDTTRVQ RSAAYNEYLI YQAPYGFGSF TVYTYVNELY KPYDHLQFFT SSDGVNYQEV | 120 |
IAQQYEDGGH LNLLVYEASD LPAGARYLKI RYSGGVILKS PSIGKVVLGS PASVQASVYS | 180 |
GIAALGTQVA LSTPTAGASI YYTTDGTDPK TSSARKLYTA PLDIPASEVL DLAAHAEITD | 240 |
GMGRKIGGRI SRFNYAAMGP EDIRVAAAAD TMVDEAQPDK AFGSAQNLGV RHSRVKDAYF | 300 |
TFSLQNFNAL SDTAKLLLHG YASDSTREPA SLQLYPAAGG WDEASVTYRS RPALLSDTPL | 360 |
AVKPLAYGLP GWMQFDVTEY AREQKALGRT SITLALRNGT QGTTQIASRE TGDRAPFLKI | 420 |
TSGGGLSPSG VVDGMDSFAL LYKRSNILIS TNDTPYFAGD GSRFTRLSTQ PGFIVYRLES | 480 |
GVRSFMVSSY FYTGIPIVHN RLYTSADGVT YKELAATVYP SGSAAGNWQQ YIYEASSLPE | 540 |
GTQYVKVEMS GDSKSWTPQL SRASLNQHTS SVQVNTAPVD SSLKVELSTP SAPAQIFFRT | 600 |
DGEGGFKTYP GPITLSGYHT IEAYAVKNGL EASPVRHFKI NATGQAQIDR YGQVISTDFA | 660 |
GKVRSDEELA ADAAADEAYY ASLQAPANRD AYGGLKGSSW TYGIPKTGFF DIRRAGGRKV | 720 |
MTTPEGNVYF SLGMNGITPN ETYTKVTGRE HNFEWIPQFT GEYRAAFLGS QDNFSYYLAN | 780 |
KFRKSGRIPS TVSFYTEAVD RLKKWGFNGA GAWTPVQVVR GQSFPYTVML PMASVTAGKL | 840 |
DGLSLFDIFA PGAAEQMDKA FAAALPALKD DPMLIGYFID NEYDYHKFHT AVPKLKGHTA | 900 |
MKRKLVDMLR SQYVTMEAFN ASWATPYTSF DQLYDAELTV RPGQAYLDMD AFFRLYLDTF | 960 |
YGTVSRLFRQ YDGNHLLLGD RWITMTAANV RVRGLLAEAS GKYLDAISIN HYSAQLDKDM | 1020 |
LNDVHTKSGG KAILLSEFSF GTAEQGLKPI VPGSAASQHE RQLRYRTYVE GAAALGYVVG | 1080 |
AHWFDYVDQA AAGRYWEGYG GERYNSGLVN VADRPYKQLL EGIMATHSKI YDVVMGKTGP | 1140 |
FQE | 1143 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.