CAZyme3D

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Entry ID

Information for CAZyme ID: AFE80523.1

Basic Information

GenBank IDAFE80523.1
FamilyGT41
Sequence Length1036
UniProt IDH9G0W4(100,100)Download
Average pLDDT?92.70
CAZy50 ID2381
CAZy50 RepNo, CAD7243539.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID9544
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderPrimates
FamilyCercopithecidae
GenusMacaca
SpeciesMacaca mulatta

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MASSVGNVAD  STGLAELAHR  EYQAGDFEAA  ERHCMQLWRQ  EPDNTGVLLL  LSSIHFQCRR60
LDRSAHFSTL  AIKQNPLLAE  AYSNLGNVYK  ERGQLQEAIE  HYRHALRLKP  DFIDGYINLA120
AALVAAGDME  GAVQAYVSAL  QYNPDLYCVR  SDLGNLLKAL  GRLEEAKACY  LKAIETQPNF180
AVAWSNLGCV  FNAQGEIWLA  IHHFEKAVTL  DPNFLDAYIN  LGNVLKEARI  FDRAVAAYLR240
ALSLSPNHAV  VHGNLACVYY  EQGLIDLAID  TYRRAIELQP  HFPDAYCNLA  NALKEKGSVA300
EAEDCYNTAL  RLCPTHADSL  NNLANIKREQ  GNIEEAVRLY  RKALEVFPEF  AAAHSNLASV360
LQQQGKLQEA  LMHYKEAIRI  SPTFADAYSN  MGNTLKEMQD  VQGALQCYTR  AIQINPAFAD420
AHSNLASIHK  DSGNIPEAIA  SYRTALKLKP  DFPDAYCNLA  HCLQIVCDWT  DYDERMKKLV480
SIVADQLEKN  RLPSVHPHHS  MLYPLSHGFR  KAIAERHGNL  CLDKINVLHK  PPYEHPKDLK540
LSDGRLRVGY  VSSDFGNHPT  SHLMQSIPGM  HNPDKFEVFC  YALSPDDGTN  FRVKVMAEAN600
HFIDLSQIPC  NGKAADRIHQ  DGIHILVNMN  GYTKGARNEL  FALRPAPIQA  MWLGYPGTSG660
ALFMDYIITD  QETSPAEVAE  QYSEKLAYMP  HTFFIGDHAN  MFPHLKKKAV  IDFKSNGHIY720
DNRIVLNGID  LKAFLDSLPD  VKIVKMKCPD  GGDNADSSNT  ALNMPVIPMN  TIAEAVIEMI780
NRGQIQITIN  GFSISNGLAT  TQINNKAATG  EEVPRTIIVT  TRSQYGLPED  AIVYCNFNQL840
YKIDPSTLQM  WANILKRVPN  SVLWLLRFPA  VGEPNIQQYA  QNMGLPQNRI  IFSPVAPKEE900
HVRRGQLADV  CLDTPLCNGH  TTGMDVLWAG  TPMVTMPGET  LASRVAASQL  TCLGCLELIA960
KNRQEYEDIA  VKLGTDLEYL  KKIRGKVWKQ  RISSPLFNTK  QYTMELERLY  LQMWEHYAAG1020
NKPDHMIKPV  EVTESA1036

Predicted 3D structure by AlphaFold2 with pLDDT = 92.70 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT41(415-702)

MASSVGNVAD  STGLAELAHR  EYQAGDFEAA  ERHCMQLWRQ  EPDNTGVLLL  LSSIHFQCRR60
LDRSAHFSTL  AIKQNPLLAE  AYSNLGNVYK  ERGQLQEAIE  HYRHALRLKP  DFIDGYINLA120
AALVAAGDME  GAVQAYVSAL  QYNPDLYCVR  SDLGNLLKAL  GRLEEAKACY  LKAIETQPNF180
AVAWSNLGCV  FNAQGEIWLA  IHHFEKAVTL  DPNFLDAYIN  LGNVLKEARI  FDRAVAAYLR240
ALSLSPNHAV  VHGNLACVYY  EQGLIDLAID  TYRRAIELQP  HFPDAYCNLA  NALKEKGSVA300
EAEDCYNTAL  RLCPTHADSL  NNLANIKREQ  GNIEEAVRLY  RKALEVFPEF  AAAHSNLASV360
LQQQGKLQEA  LMHYKEAIRI  SPTFADAYSN  MGNTLKEMQD  VQGALQCYTR  AIQINPAFAD420
AHSNLASIHK  DSGNIPEAIA  SYRTALKLKP  DFPDAYCNLA  HCLQIVCDWT  DYDERMKKLV480
SIVADQLEKN  RLPSVHPHHS  MLYPLSHGFR  KAIAERHGNL  CLDKINVLHK  PPYEHPKDLK540
LSDGRLRVGY  VSSDFGNHPT  SHLMQSIPGM  HNPDKFEVFC  YALSPDDGTN  FRVKVMAEAN600
HFIDLSQIPC  NGKAADRIHQ  DGIHILVNMN  GYTKGARNEL  FALRPAPIQA  MWLGYPGTSG660
ALFMDYIITD  QETSPAEVAE  QYSEKLAYMP  HTFFIGDHAN  MFPHLKKKAV  IDFKSNGHIY720
DNRIVLNGID  LKAFLDSLPD  VKIVKMKCPD  GGDNADSSNT  ALNMPVIPMN  TIAEAVIEMI780
NRGQIQITIN  GFSISNGLAT  TQINNKAATG  EEVPRTIIVT  TRSQYGLPED  AIVYCNFNQL840
YKIDPSTLQM  WANILKRVPN  SVLWLLRFPA  VGEPNIQQYA  QNMGLPQNRI  IFSPVAPKEE900
HVRRGQLADV  CLDTPLCNGH  TTGMDVLWAG  TPMVTMPGET  LASRVAASQL  TCLGCLELIA960
KNRQEYEDIA  VKLGTDLEYL  KKIRGKVWKQ  RISSPLFNTK  QYTMELERLY  LQMWEHYAAG1020
NKPDHMIKPV  EVTESA1036

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help