Information for CAZyme ID: AFD27050.1
Basic Information
| GenBank ID | AFD27050.1 |
| Family | GH42 |
| Sequence Length | 666 |
| UniProt ID | H8H131(100,100) |
| Average pLDDT? | 94.84 |
| CAZy50 ID | 36974 |
| CAZy50 Rep | No, ABF44258.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 745776 |
| Kingdom | Bacteria |
| Phylum | Deinococcota |
| Class | Deinococci |
| Order | Deinococcales |
| Family | Deinococcaceae |
| Genus | Deinococcus |
| Species | Deinococcus gobiensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSSLPPSDSL PFLSLGVCDY PEHVPQPLWA GYARDQKALG LEFVRLAEFA WSRMEPRPGE | 60 |
| YDWAWLDEAV ETSAAAGLKV VLCTPTAAPP AWLVEAHPEI LPVGRDGQVK SFGSRRHYDF | 120 |
| SSAVYREHSR RITRAVAERY GRHPAVVGWQ TDNEFGWGDT AQSFSPAVHA AFHAWLERRY | 180 |
| GTVDALNAAW GNVFWSMDYS GWAQVPLPHH AVSEINPAHA LDFLRFSSGE VAAFQAEQVA | 240 |
| LLREHSPGRF VTHNYMGFFS AYDHYEVSRG LDFASWDSYP TGTLQAIHEW KLLAPHFALD | 300 |
| YARTGHPDVT AFNHDLYRGM VTPGAGQATP SFWVMEQQCG QVNWASANPL PAPGAVALWT | 360 |
| EQAWAHGADA VSYFRWRAAT VGQEVLHSGL LRHSGRPDQG HREVAALRPQ ALPLAPTRAR | 420 |
| VALLHDYESL WLYNLQPHSE GLNYWAQTFT YYRALRALGV DVDILHPDRD LSGYAVVVAP | 480 |
| ALTLMTPERA AHLTASAGHS RLVFGPRTAF RTAAGGTPET GQFGDLAGLI GAELSRYDSL | 540 |
| YAGMTQDVEG EGGARHSAHA WAESYDLAGA EALWHYRGGP LDGEAAVVRH GAVTTVGAHS | 600 |
| ESLVRGVLRG ALREAGVETA ELPEGVRLTR RGPHTLLQNW TGESVHWQGR TLAPYSSALL | 660 |
| PQEVMA | 666 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH42(20-407)
| MSSLPPSDSL PFLSLGVCDY PEHVPQPLWA GYARDQKALG LEFVRLAEFA WSRMEPRPGE | 60 |
| YDWAWLDEAV ETSAAAGLKV VLCTPTAAPP AWLVEAHPEI LPVGRDGQVK SFGSRRHYDF | 120 |
| SSAVYREHSR RITRAVAERY GRHPAVVGWQ TDNEFGWGDT AQSFSPAVHA AFHAWLERRY | 180 |
| GTVDALNAAW GNVFWSMDYS GWAQVPLPHH AVSEINPAHA LDFLRFSSGE VAAFQAEQVA | 240 |
| LLREHSPGRF VTHNYMGFFS AYDHYEVSRG LDFASWDSYP TGTLQAIHEW KLLAPHFALD | 300 |
| YARTGHPDVT AFNHDLYRGM VTPGAGQATP SFWVMEQQCG QVNWASANPL PAPGAVALWT | 360 |
| EQAWAHGADA VSYFRWRAAT VGQEVLHSGL LRHSGRPDQG HREVAALRPQ ALPLAPTRAR | 420 |
| VALLHDYESL WLYNLQPHSE GLNYWAQTFT YYRALRALGV DVDILHPDRD LSGYAVVVAP | 480 |
| ALTLMTPERA AHLTASAGHS RLVFGPRTAF RTAAGGTPET GQFGDLAGLI GAELSRYDSL | 540 |
| YAGMTQDVEG EGGARHSAHA WAESYDLAGA EALWHYRGGP LDGEAAVVRH GAVTTVGAHS | 600 |
| ESLVRGVLRG ALREAGVETA ELPEGVRLTR RGPHTLLQNW TGESVHWQGR TLAPYSSALL | 660 |
| PQEVMA | 666 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.