CAZyme3D

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Entry ID

Information for CAZyme ID: AEY90078.1

Basic Information

GenBank IDAEY90078.1
FamilyGT87
Sequence Length377
UniProt IDH2JVS2(100,100)Download
Average pLDDT?94.01
CAZy50 ID76194
CAZy50 RepNo, UQA93604.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1133850
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTPSCPALLL  LALSLAAFVT  LCVLRGAPMA  DLLVYRAEGA  AVAHGTDLYG  FTVTEWHLPA60
TYPPFAAILF  VPAVWLPVPV  LKALFLAGNA  LLLATLVALS  ARLASRPLPP  APLCTATALA120
LWLEPVFQTL  LFGQINLALA  CLVLWDLTRP  AGARAKGLAL  GMAAGVKLTP  AVFLAYLLVR180
GRVREAATAG  TAFAGTVALG  AVLLPSASAD  FWTRRLYETG  RVGQAWIVDN  QSLRGLVARA240
LGDPAPGLAW  ALPAAVVAVL  GLGLAARARR  ESHGVLLTAC  TALLVCPISW  THHWVWCVPL300
LAVLLAEGRT  RTAVLVALVF  TARTMWLVPH  EGARDLELPW  WQQPLAGAYP  LLALGLLVSY360
DSATGRRCAP  APVPGPR377

Predicted 3D structure by AlphaFold2 with pLDDT = 94.01 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT87(61-287)

MTPSCPALLL  LALSLAAFVT  LCVLRGAPMA  DLLVYRAEGA  AVAHGTDLYG  FTVTEWHLPA60
TYPPFAAILF  VPAVWLPVPV  LKALFLAGNA  LLLATLVALS  ARLASRPLPP  APLCTATALA120
LWLEPVFQTL  LFGQINLALA  CLVLWDLTRP  AGARAKGLAL  GMAAGVKLTP  AVFLAYLLVR180
GRVREAATAG  TAFAGTVALG  AVLLPSASAD  FWTRRLYETG  RVGQAWIVDN  QSLRGLVARA240
LGDPAPGLAW  ALPAAVVAVL  GLGLAARARR  ESHGVLLTAC  TALLVCPISW  THHWVWCVPL300
LAVLLAEGRT  RTAVLVALVF  TARTMWLVPH  EGARDLELPW  WQQPLAGAYP  LLALGLLVSY360
DSATGRRCAP  APVPGPR377

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help