CAZyme3D

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Entry ID

Information for CAZyme ID: AEX64651.1

Basic Information

GenBank IDAEX64651.1
FamilyGH2
Sequence Length234
UniProt IDH8ZUF2(100,100)Download
Average pLDDT?98.15
CAZy50 ID39136
CAZy50 RepNo, QCQ35503.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID77133
KingdomBacteria
Phylum
Class
Order
Family
Genus
Speciesuncultured bacterium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

RAEIGNALRS  MHHEEDTKLM  LEMGVNAVRL  AHYQQAEYMY  DLMDQSGIIT  WAEIPFIGPG60
GYADKGFIDS  EAFKKNGEEQ  LKELIRQNYN  HPSICFWGLF  NELTERGDNP  VTYITELNEL120
AHSEDPTRLT  TSASNQNGGL  NFITDCIAWN  RYDGWYGGMP  DALAKFLDQT  HNQYPQLRIA180
ISEYGAGASI  YHQSDSLKRP  NPAGWWHPEN  WQTFYHIENW  KIIHERPFVW  GSFI234

Predicted 3D structure by AlphaFold2 with pLDDT = 98.15 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

RAEIGNALRS  MHHEEDTKLM  LEMGVNAVRL  AHYQQAEYMY  DLMDQSGIIT  WAEIPFIGPG60
GYADKGFIDS  EAFKKNGEEQ  LKELIRQNYN  HPSICFWGLF  NELTERGDNP  VTYITELNEL120
AHSEDPTRLT  TSASNQNGGL  NFITDCIAWN  RYDGWYGGMP  DALAKFLDQT  HNQYPQLRIA180
ISEYGAGASI  YHQSDSLKRP  NPAGWWHPEN  WQTFYHIENW  KIIHERPFVW  GSFI234

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help