CAZyme3D

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Entry ID

Information for CAZyme ID: AEX64525.1

Basic Information

GenBank IDAEX64525.1
FamilyGH2
Sequence Length249
UniProt IDH8ZTZ3(100,100)Download
Average pLDDT?97.05
CAZy50 ID49426
CAZy50 RepNo, AKI95125.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID77133
KingdomBacteria
Phylum
Class
Order
Family
Genus
Speciesuncultured bacterium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

TFPNGRGINL  PMNTKDISIM  KWQHANSFRT  SHYPYSEEMM  RLCDEEGIVV  IDETTAVGVN60
LQFGGGANFG  GERIGTFDKE  HGVQTQEHHK  DVVRDLISRD  KNHACVVMWS  IANEPDSAAE120
GAYDYFKPLF  DLAKEIDPQK  RPCTLVSVQG  TTADTDCSSK  LSDVICLNRY  YGWYFGGPDL180
EISEKGLRKE  LSDWGKLGKP  VMFTEYGADT  VSGLHDTTSV  MYTEEYQVEY  YEMNNKVFDE240
FEFVVGEQA249

Predicted 3D structure by AlphaFold2 with pLDDT = 97.05 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

TFPNGRGINL  PMNTKDISIM  KWQHANSFRT  SHYPYSEEMM  RLCDEEGIVV  IDETTAVGVN60
LQFGGGANFG  GERIGTFDKE  HGVQTQEHHK  DVVRDLISRD  KNHACVVMWS  IANEPDSAAE120
GAYDYFKPLF  DLAKEIDPQK  RPCTLVSVQG  TTADTDCSSK  LSDVICLNRY  YGWYFGGPDL180
EISEKGLRKE  LSDWGKLGKP  VMFTEYGADT  VSGLHDTTSV  MYTEEYQVEY  YEMNNKVFDE240
FEFVVGEQA249

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help