CAZyme3D

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Entry ID

Information for CAZyme ID: AEW85640.1

Basic Information

GenBank IDAEW85640.1
FamilyGH163
Sequence Length714
UniProt IDG8X6Q5(100,100)Download
Average pLDDT?90.31
CAZy50 ID36768
CAZy50 RepNo, QOG82468.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1041826
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium columnare

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MREIFSFYIA  LSKICLAIIF  FFVLCSCSLK  PYTDLEDAKL  YSDKYKIIFD  YKTKLENLEK60
DYFYYELKKR  SSNPEIISKD  KNKEGLLIRV  VLSSQQMFDY  QIKIEDKNEI  QLIANSEKNL120
KWLFNQFLKK  LSIQDDRIKT  QDLFPAIITI  KESTVSFPFE  YREPHFSPVL  QPNADVLYNS180
NNIENDWGIW  GHNLGKLLAN  EGNIQTFALV  ENKRNASQIC  FSSEATYNYI  KNYIIDNLGI240
NTNKRYSVML  VPNDNKLVCL  DPRCKRLGNT  LSNATPSVVY  LMEKLAKEFP  QYNFFTTAYL300
TTETPPEKEL  PKNTGVMIST  INFPKNVYFE  NKPQVNPFEE  KILKWKQKVN  KVYLWDYASN360
FDDYLTPYPL  FYRLQKQLEY  FKKMGIKGVF  INGSGYDYTS  FQGLKTFVIS  SLLMDYNLKI420
EDLVKKYFKQ  EFPQNHQLLS  EYYIDFEKAA  EKENLPCSLY  EKGSKNINAS  KFFNFYNQLS480
QTIDSSQPKE  KSKIKELITA  LSFTYLKLLL  ENEQNGYYII  EENTISIKPD  VIQAYNRLKK540
YTNYEGLKNF  KEQDGAIQDF  LKEFEEKIIK  NKQPLNKLLG  KKLEILSTLD  EDYTNINMLT600
DNAIGFISDY  HHGWFLTSQE  DLVVRLPSIE  VSNATLKINF  LNNPSLKIFL  PTKIQIYKNG660
NLYTELTDDS  ESKNEKRIGV  FKTKIAIHKK  EEVMIKVITN  AKNKKTACDE  IQLF714

Predicted 3D structure by AlphaFold2 with pLDDT = 90.31 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH163(206-442)

MREIFSFYIA  LSKICLAIIF  FFVLCSCSLK  PYTDLEDAKL  YSDKYKIIFD  YKTKLENLEK60
DYFYYELKKR  SSNPEIISKD  KNKEGLLIRV  VLSSQQMFDY  QIKIEDKNEI  QLIANSEKNL120
KWLFNQFLKK  LSIQDDRIKT  QDLFPAIITI  KESTVSFPFE  YREPHFSPVL  QPNADVLYNS180
NNIENDWGIW  GHNLGKLLAN  EGNIQTFALV  ENKRNASQIC  FSSEATYNYI  KNYIIDNLGI240
NTNKRYSVML  VPNDNKLVCL  DPRCKRLGNT  LSNATPSVVY  LMEKLAKEFP  QYNFFTTAYL300
TTETPPEKEL  PKNTGVMIST  INFPKNVYFE  NKPQVNPFEE  KILKWKQKVN  KVYLWDYASN360
FDDYLTPYPL  FYRLQKQLEY  FKKMGIKGVF  INGSGYDYTS  FQGLKTFVIS  SLLMDYNLKI420
EDLVKKYFKQ  EFPQNHQLLS  EYYIDFEKAA  EKENLPCSLY  EKGSKNINAS  KFFNFYNQLS480
QTIDSSQPKE  KSKIKELITA  LSFTYLKLLL  ENEQNGYYII  EENTISIKPD  VIQAYNRLKK540
YTNYEGLKNF  KEQDGAIQDF  LKEFEEKIIK  NKQPLNKLLG  KKLEILSTLD  EDYTNINMLT600
DNAIGFISDY  HHGWFLTSQE  DLVVRLPSIE  VSNATLKINF  LNNPSLKIFL  PTKIQIYKNG660
NLYTELTDDS  ESKNEKRIGV  FKTKIAIHKK  EEVMIKVITN  AKNKKTACDE  IQLF714

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help