CAZyme3D

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Entry ID

Information for CAZyme ID: AEW43149.1

Basic Information

GenBank IDAEW43149.1
FamilyGT1
Sequence Length520
UniProt IDG9LPS6(100,100)Download
Average pLDDT?93.19
CAZy50 ID63901
CAZy50 RepNo, AEW43120.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID7091
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderLepidoptera
FamilyBombycidae
GenusBombyx
SpeciesBombyx mori

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFSLNKIVLI  VTIIHGTQAA  RILGVFPTPS  ISHQVVFRRL  TLELHKRGHE  LVVVTTDPVF60
KTGQAPANYT  EIDVHDVSYS  AWRDGFMKTS  RGSANDIYEQ  ISRMLNLRID  LFELQMKNKE120
VQSLLSKRKE  SKFDLLLLEA  CIRPTMVLTH  VFDAPAILIS  SFGGVEFVLK  MIGVPTHPIL180
YPPSLHQRIY  NLTFSEKIRE  VYTHYYLEYL  YWRSEPQENQ  MAKRLFGPNT  PTIRETQKNV240
QMALLNVHAI  WEENRPVPPN  VIYIGGIHQN  PEKELPKDLK  EYLDSSKHGV  IYISFGTNVE300
PSLLPPERIQ  ILVKVFSKLP  YDVLWKWDKD  ELPGSSKNIR  IAKWLPQSDL  LRHPKIKAFI360
TQGGLQSTEE  AITAGVPLIG  MPMLMDQWYN  VEKYVRHNIG  LRLDLGSVTE  ESLRNAIDTI420
TGDESYRQNI  ARLRSQVYDQ  PQSSVDRAVW  WTEHVLRHGG  ATHLRAAGAL  KSWTEYFELN480
LIAVLLVTFL  IIITFIAKLI  SSFVRSLKMY  FNYNDKVKLH  520

Predicted 3D structure by AlphaFold2 with pLDDT = 93.19 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT1(256-442)

MFSLNKIVLI  VTIIHGTQAA  RILGVFPTPS  ISHQVVFRRL  TLELHKRGHE  LVVVTTDPVF60
KTGQAPANYT  EIDVHDVSYS  AWRDGFMKTS  RGSANDIYEQ  ISRMLNLRID  LFELQMKNKE120
VQSLLSKRKE  SKFDLLLLEA  CIRPTMVLTH  VFDAPAILIS  SFGGVEFVLK  MIGVPTHPIL180
YPPSLHQRIY  NLTFSEKIRE  VYTHYYLEYL  YWRSEPQENQ  MAKRLFGPNT  PTIRETQKNV240
QMALLNVHAI  WEENRPVPPN  VIYIGGIHQN  PEKELPKDLK  EYLDSSKHGV  IYISFGTNVE300
PSLLPPERIQ  ILVKVFSKLP  YDVLWKWDKD  ELPGSSKNIR  IAKWLPQSDL  LRHPKIKAFI360
TQGGLQSTEE  AITAGVPLIG  MPMLMDQWYN  VEKYVRHNIG  LRLDLGSVTE  ESLRNAIDTI420
TGDESYRQNI  ARLRSQVYDQ  PQSSVDRAVW  WTEHVLRHGG  ATHLRAAGAL  KSWTEYFELN480
LIAVLLVTFL  IIITFIAKLI  SSFVRSLKMY  FNYNDKVKLH  520

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help