CAZyme3D

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Entry ID

Information for CAZyme ID: AET42930.1

Basic Information

GenBank IDAET42930.1
FamilyGH38
Sequence Length968
UniProt IDG8GCS4(100,100)Download
Average pLDDT?95.47
CAZy50 ID14830
CAZy50 RepNo, ACP56281.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID555311
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSaccharolobus
SpeciesSaccharolobus solfataricus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRNINELEAR  LILTLGNSFR  NLRQLRWNLE  NHNKAYLEIE  GKGNSYLLIV  DHKGSGLIRL60
DDKPYFELDR  YHTLIPIPFG  NHKISLELSH  YMDFGEKVDI  SAGIPFYTEI  DSNAYKLYVY120
GSQILDLVRS  INDNEVKDDL  ISALSKALHE  AYFETISKEQ  LFILSKLIRT  TLDVSRMVQE180
IEEPLDVYKE  DENRSKFEGA  LNTLRSELSK  LVNKYGKRGV  LVGTGHAHID  TAWLWPFDET240
RRKVLRTFST  ILTLLDKYDF  HFIQSAAIYY  EWVKADSPEL  FVRIKEKVKE  GKWELAALYV300
ESDANMVSGE  SLARQFLYSQ  RFYLENFGKL  ANILWLPDTF  GFSASLPQIA  KLGGVKAFAT360
HKVFWNDTNK  FPYNVFKWVG  PNGDYLPAIA  FGHGKGGYNS  DFSASSVLEQ  YNNWAQKDQP420
MLYSYGYGDG  GGGPNEDMLI  RAEAVNLLPI  LPKVELSGVN  SYIQRIVPVE  EWRGELYLET480
HRGVLTSHSK  MKLLNRSAEI  ALREAELWST  LARTYDKEVF  TKLWKVVLKD  QFHDVLPGSA540
IKDVYKVAYQ  ELEEVINKAN  NVASEAMQKL  VGGSGDKTFV  FNSLSWDREE  YIEADGKLVK600
VRVPSVGFSL  LEPVEVRDKA  VINENNAEYL  VENKYFRVRI  SKSGQVLSLF  DKEANREVLR660
DKSNLLIAYE  NIPGWADAWD  IEKGFEDRSF  EIRASSSEIV  NNDGIVASIK  FTYKFRRSEI720
IQIVRVYADS  RRIDFITTLR  MRDRELLVKS  WFNFDLNVER  AVSDIPFGVV  ERFTWSNTSW780
DKARFEVPIQ  KFVDFSESEY  GAALLNNGKY  GATLRGSSVG  LSLTKTPIYP  DPSTDLEEVT840
FIYSLYPHIG  DWKRAEVIKR  AYELNVPLRV  VKGVSEVKRK  SFIRINDSKL  ILEAVKVAED900
DNNSVVLRLY  EYENTRGEAY  VEVPFNVTEA  RSLDLLELNE  VPRDIVIEGN  RIKVKYKNRD960
ILTISVRG968

Predicted 3D structure by AlphaFold2 with pLDDT = 95.47 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH38(224-466)

MRNINELEAR  LILTLGNSFR  NLRQLRWNLE  NHNKAYLEIE  GKGNSYLLIV  DHKGSGLIRL60
DDKPYFELDR  YHTLIPIPFG  NHKISLELSH  YMDFGEKVDI  SAGIPFYTEI  DSNAYKLYVY120
GSQILDLVRS  INDNEVKDDL  ISALSKALHE  AYFETISKEQ  LFILSKLIRT  TLDVSRMVQE180
IEEPLDVYKE  DENRSKFEGA  LNTLRSELSK  LVNKYGKRGV  LVGTGHAHID  TAWLWPFDET240
RRKVLRTFST  ILTLLDKYDF  HFIQSAAIYY  EWVKADSPEL  FVRIKEKVKE  GKWELAALYV300
ESDANMVSGE  SLARQFLYSQ  RFYLENFGKL  ANILWLPDTF  GFSASLPQIA  KLGGVKAFAT360
HKVFWNDTNK  FPYNVFKWVG  PNGDYLPAIA  FGHGKGGYNS  DFSASSVLEQ  YNNWAQKDQP420
MLYSYGYGDG  GGGPNEDMLI  RAEAVNLLPI  LPKVELSGVN  SYIQRIVPVE  EWRGELYLET480
HRGVLTSHSK  MKLLNRSAEI  ALREAELWST  LARTYDKEVF  TKLWKVVLKD  QFHDVLPGSA540
IKDVYKVAYQ  ELEEVINKAN  NVASEAMQKL  VGGSGDKTFV  FNSLSWDREE  YIEADGKLVK600
VRVPSVGFSL  LEPVEVRDKA  VINENNAEYL  VENKYFRVRI  SKSGQVLSLF  DKEANREVLR660
DKSNLLIAYE  NIPGWADAWD  IEKGFEDRSF  EIRASSSEIV  NNDGIVASIK  FTYKFRRSEI720
IQIVRVYADS  RRIDFITTLR  MRDRELLVKS  WFNFDLNVER  AVSDIPFGVV  ERFTWSNTSW780
DKARFEVPIQ  KFVDFSESEY  GAALLNNGKY  GATLRGSSVG  LSLTKTPIYP  DPSTDLEEVT840
FIYSLYPHIG  DWKRAEVIKR  AYELNVPLRV  VKGVSEVKRK  SFIRINDSKL  ILEAVKVAED900
DNNSVVLRLY  EYENTRGEAY  VEVPFNVTEA  RSLDLLELNE  VPRDIVIEGN  RIKVKYKNRD960
ILTISVRG968

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help