CAZyme3D

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Entry ID

Information for CAZyme ID: AEP68459.1

Basic Information

GenBank IDAEP68459.1
FamilyGT20
Sequence Length495
UniProt IDG4XSR1(100,100)Download
Average pLDDT?91.94
CAZy50 ID7265
CAZy50 RepNo, CCO14354.1
Structure Cluster-
EC Number(s)2.4.1.15
Substrates(s)-

Taxonomy

Tax ID4932
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilySaccharomycetaceae
GenusSaccharomyces
SpeciesSaccharomyces cerevisiae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTTDNAKAQL  TSSSGGNIIV  VSNRLPVTIT  KNSSTGQYEY  AMSSGGLVTA  LEGLKKTYTF60
KWFGWPGLEI  PDDEKDQVRK  DLLEKFNAVP  IFLSDEIADL  HYNGFSNSIL  WPLFHYHPGE120
INFDENAWLA  YNEANQTFTN  EIAKTMNHND  LIWVHDYHLM  LVPEMLRVKI  HEKQLQNVKV180
GWFLHTPFPS  SEIYRILPVR  QEILKGVLSC  DLVGFHTYDY  ARHFLSSVQR  VLNVNTLPNG240
VEYQGRFVNV  GAFPIGIDVD  KFTDGLKKES  VQKRIQQLKE  TFKGCKIIVG  VDRLDYIKGV300
PQKLHAMEVF  LNEHPEWRGK  VVLVQVAVPS  RGDVEEYQYL  RSVVNELVGR  INGQFGTVEF360
VPIHFMHKSI  PFEELISLYA  VSDVCLVSST  RDGMNLVSYE  YIACQEEKKG  SLILSEFTGA420
AQSLNGAIIV  NPWNTDDLSD  AINEALTLPD  VKKEVNWEKL  YKYISKYTSA  FWGENFVHEL480
YSTSSSSTSS  SATKN495

Predicted 3D structure by AlphaFold2 with pLDDT = 91.94 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT20(13-481)

MTTDNAKAQL  TSSSGGNIIV  VSNRLPVTIT  KNSSTGQYEY  AMSSGGLVTA  LEGLKKTYTF60
KWFGWPGLEI  PDDEKDQVRK  DLLEKFNAVP  IFLSDEIADL  HYNGFSNSIL  WPLFHYHPGE120
INFDENAWLA  YNEANQTFTN  EIAKTMNHND  LIWVHDYHLM  LVPEMLRVKI  HEKQLQNVKV180
GWFLHTPFPS  SEIYRILPVR  QEILKGVLSC  DLVGFHTYDY  ARHFLSSVQR  VLNVNTLPNG240
VEYQGRFVNV  GAFPIGIDVD  KFTDGLKKES  VQKRIQQLKE  TFKGCKIIVG  VDRLDYIKGV300
PQKLHAMEVF  LNEHPEWRGK  VVLVQVAVPS  RGDVEEYQYL  RSVVNELVGR  INGQFGTVEF360
VPIHFMHKSI  PFEELISLYA  VSDVCLVSST  RDGMNLVSYE  YIACQEEKKG  SLILSEFTGA420
AQSLNGAIIV  NPWNTDDLSD  AINEALTLPD  VKKEVNWEKL  YKYISKYTSA  FWGENFVHEL480
YSTSSSSTSS  SATKN495

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help