CAZyme3D

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Entry ID

Information for CAZyme ID: AEN97395.1

Basic Information

GenBank IDAEN97395.1
FamilyCE2
Sequence Length351
UniProt IDG2SXW9(100,100)Download
Average pLDDT?97.52
CAZy50 ID33969
CAZy50 RepNo, BBF42855.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID585394
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia hominis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVRNIEPDDP  MLQYSGRIDD  DDPKAPVLIY  AASWVKMIFT  GTSVAVTLAN  HHAYWTNEMG60
YLLDGVQGRI  RLLNDGKKKT  YEIAGQLPDA  RHELMLFKRM  DACHTVTFYG  FTVDGGADLL120
PPEPKPARRM  EVFGDSVSCG  EVSEAVDYVG  KEDPVHDGQY  SNSWYSYAWM  TARKLGAELH180
DTSQGGIALL  DGTGWFGAPA  YYGVESCYDK  LAYNPDLGEV  KKWDFSRYTP  QVVVVAIGQN240
DNHPVDYMAS  DPECSAAEHW  RKRYREFIET  LMKRYPKAQI  ILTTTILKHH  PNWDASIGTV300
CGQIASERVH  HFLYRRNGSG  TPGHIRIPEA  EEMSEELASY  IRSLGDKIWD  V351

Predicted 3D structure by AlphaFold2 with pLDDT = 97.52 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(129-341)

MVRNIEPDDP  MLQYSGRIDD  DDPKAPVLIY  AASWVKMIFT  GTSVAVTLAN  HHAYWTNEMG60
YLLDGVQGRI  RLLNDGKKKT  YEIAGQLPDA  RHELMLFKRM  DACHTVTFYG  FTVDGGADLL120
PPEPKPARRM  EVFGDSVSCG  EVSEAVDYVG  KEDPVHDGQY  SNSWYSYAWM  TARKLGAELH180
DTSQGGIALL  DGTGWFGAPA  YYGVESCYDK  LAYNPDLGEV  KKWDFSRYTP  QVVVVAIGQN240
DNHPVDYMAS  DPECSAAEHW  RKRYREFIET  LMKRYPKAQI  ILTTTILKHH  PNWDASIGTV300
CGQIASERVH  HFLYRRNGSG  TPGHIRIPEA  EEMSEELASY  IRSLGDKIWD  V351

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help