CAZyme3D

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Entry ID

Information for CAZyme ID: AEI44662.1

Basic Information

GenBank IDAEI44662.1
FamilyGH18
Sequence Length535
UniProt IDF8FGK2(100,100)Download
Average pLDDT?92.34
CAZy50 ID61510
CAZy50 RepNo, QGQ94003.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1036673
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus mucilaginosus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLSLIQKTIP  AAALLLLAAT  GSALAYDVSL  KPFTDVSNGD  WFQEEVYSLS  AIGLIDGYPD60
ATFQPDGMLT  REAFLKLLVQ  SKRFDPAVPP  GDAPADVGPS  RWSYPYIAAA  YERKWIDVLL120
DSRRALDPQR  TITRGEVAAV  AGRALLDAQP  QEARERWMSQ  GWQEERERRK  YTDGDTIGEG180
LRPYAYYAVN  RGIMEGDETG  FHPQQPLTRK  EAAAIFYRLI  DAETAGAKLE  HTGFYAIRSY240
PAIGRIPLLS  QVTFGWSHLE  YPSPGTARLN  TEKTEYRIPS  GWEEALGAAG  SAKAGKELMV300
YYGDKNLKDF  LKDEGAQNAF  IDSLKAVLTD  KKYGFSGVCM  DLEGLLEPAS  AADYVQFLHR360
VKKSIPDYKL  TVAVQPDYYY  KGYDLKEIGG  LADTVILMAY  NFTHDESRLP  SAPLPLVNDS420
VKRALALVPK  EKLVLGISKQ  ANQWVTAPDG  GTDSFNPEIA  EVEKRLGAPG  VSQSMSYPYF480
LKRMAFQDER  GSHEMYYEDT  ESIEKKLWLA  KYYGLKGVSL  WYMGNYTDSD  WKLFE535

Predicted 3D structure by AlphaFold2 with pLDDT = 92.34 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : SLH(33-72)+GH18(241-528)

MLSLIQKTIP  AAALLLLAAT  GSALAYDVSL  KPFTDVSNGD  WFQEEVYSLS  AIGLIDGYPD60
ATFQPDGMLT  REAFLKLLVQ  SKRFDPAVPP  GDAPADVGPS  RWSYPYIAAA  YERKWIDVLL120
DSRRALDPQR  TITRGEVAAV  AGRALLDAQP  QEARERWMSQ  GWQEERERRK  YTDGDTIGEG180
LRPYAYYAVN  RGIMEGDETG  FHPQQPLTRK  EAAAIFYRLI  DAETAGAKLE  HTGFYAIRSY240
PAIGRIPLLS  QVTFGWSHLE  YPSPGTARLN  TEKTEYRIPS  GWEEALGAAG  SAKAGKELMV300
YYGDKNLKDF  LKDEGAQNAF  IDSLKAVLTD  KKYGFSGVCM  DLEGLLEPAS  AADYVQFLHR360
VKKSIPDYKL  TVAVQPDYYY  KGYDLKEIGG  LADTVILMAY  NFTHDESRLP  SAPLPLVNDS420
VKRALALVPK  EKLVLGISKQ  ANQWVTAPDG  GTDSFNPEIA  EVEKRLGAPG  VSQSMSYPYF480
LKRMAFQDER  GSHEMYYEDT  ESIEKKLWLA  KYYGLKGVSL  WYMGNYTDSD  WKLFE535

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help