CAZyme3D

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Entry ID

Information for CAZyme ID: AEH22702.1

Basic Information

GenBank IDAEH22702.1
FamilyGH0
Sequence Length707
UniProt IDF8C4N5(100,100)Download
Average pLDDT?95.20
CAZy50 ID34465
CAZy50 RepNo, QPM68696.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID795359
KingdomBacteria
PhylumThermodesulfobacteriota
ClassThermodesulfobacteria
OrderThermodesulfobacteriales
FamilyThermodesulfobacteriaceae
GenusThermodesulfobacterium
SpeciesThermodesulfobacterium geofontis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKENSFIESF  IESYTLKHEE  SFAIFDHYGN  IDISKNNEEG  VYYEGTRFLS  YWKFYLFDKN60
PILLSSAVKE  DNSLLTVDLT  NPDIIKNGEI  IIPKGNIHIL  RSKFLYENCC  YEKIHLKNFF120
LLPVELELNF  YFNNDFADIF  EVRGYKRKRK  GKFFPVEVKK  DKIKFIYEGL  DNIIRETIVS180
FNPPPENIFS  TKATYKVKLN  PKESFTFYLT  VKCLIEKQNL  TKCSYKKAFY  YIKRRVKDWE240
NKSCKIYTSN  EQFNQWLKRS  WADIVMLTTS  TEYGVYPYAG  IPWFNTVFGR  DGIITALECL300
WINPSIAKGT  LAFLAHHQAK  EFNPEQDAEP  GKIIHEIRKG  EMARTGEIPY  SKYYGSVDAT360
PLFVILASKY  FERTGDIDFI  KSIWKNIVLA  ISWIDNYGDV  DGDGFVEYFP  SKKGLTNKGW420
KDSEDSIFYE  DGTLVKPPVA  LVEVQGYVYK  AKREASKLAR  ILGEKELASK  WEKSAEKIKE480
LIEEKFWCDE  MNCYVLALDG  DKKQCKVRAS  NAGHLLFTKA  ITPSKARILA  SLFFEKHFFS540
GWGIRTLSSL  EVRYNPLSYH  NGSVWPHDNA  LIAFGLSLYG  FKEEAMKILK  ALFEASTFFR600
LHRIPELFCG  FERRPNEGPT  YYPVACHPQA  WSAGAVFLIL  QGCLGLSFEK  NEIIFKHPML660
PQFLEELWIK  DLAVKNGKVD  LYLKRYGNDV  VVNIIKKEGE  VKIFVEK707

Predicted 3D structure by AlphaFold2 with pLDDT = 95.20 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH133(274-636)

MKENSFIESF  IESYTLKHEE  SFAIFDHYGN  IDISKNNEEG  VYYEGTRFLS  YWKFYLFDKN60
PILLSSAVKE  DNSLLTVDLT  NPDIIKNGEI  IIPKGNIHIL  RSKFLYENCC  YEKIHLKNFF120
LLPVELELNF  YFNNDFADIF  EVRGYKRKRK  GKFFPVEVKK  DKIKFIYEGL  DNIIRETIVS180
FNPPPENIFS  TKATYKVKLN  PKESFTFYLT  VKCLIEKQNL  TKCSYKKAFY  YIKRRVKDWE240
NKSCKIYTSN  EQFNQWLKRS  WADIVMLTTS  TEYGVYPYAG  IPWFNTVFGR  DGIITALECL300
WINPSIAKGT  LAFLAHHQAK  EFNPEQDAEP  GKIIHEIRKG  EMARTGEIPY  SKYYGSVDAT360
PLFVILASKY  FERTGDIDFI  KSIWKNIVLA  ISWIDNYGDV  DGDGFVEYFP  SKKGLTNKGW420
KDSEDSIFYE  DGTLVKPPVA  LVEVQGYVYK  AKREASKLAR  ILGEKELASK  WEKSAEKIKE480
LIEEKFWCDE  MNCYVLALDG  DKKQCKVRAS  NAGHLLFTKA  ITPSKARILA  SLFFEKHFFS540
GWGIRTLSSL  EVRYNPLSYH  NGSVWPHDNA  LIAFGLSLYG  FKEEAMKILK  ALFEASTFFR600
LHRIPELFCG  FERRPNEGPT  YYPVACHPQA  WSAGAVFLIL  QGCLGLSFEK  NEIIFKHPML660
PQFLEELWIK  DLAVKNGKVD  LYLKRYGNDV  VVNIIKKEGE  VKIFVEK707

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help