Information for CAZyme ID: AEG12381.1
Basic Information
| GenBank ID | AEG12381.1 |
| Family | GH3 |
| Sequence Length | 886 |
| UniProt ID | G0AX42(100,100) |
| Average pLDDT? | 90.08 |
| CAZy50 ID | 10057 |
| CAZy50 Rep | No, AWL11389.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 693974 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella baltica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSVIALRPKT FSLSLLAVLT CASLSGCSKT EQIKAADSQS VKPSDVAASS SPNSPNGYSI | 60 |
| NGKSTDINIW PQLTIPHKNH EDVEKRVADL LAKMTLEQKV AQMIQPEIRD ITVEDMRKYG | 120 |
| FGSYLNGGGS YPNQDKHATP ADWIALADAM YQASMDDSLD GISIPTMWGT DAVHGHNNVI | 180 |
| GATLFPHNIG LGAAHHPELI QQIAAITAKE VMVTGIDWVF APTVAVVRDD RWGRTYEGYS | 240 |
| EDPVIVKSYS HAIVEGLQGG NDKDFLSDQH VIATVKHFLG DGGTEGGDDQ GDNIASEQAL | 300 |
| FDIHAQGYVG GLTAGAQTVM ASFNSWHGAK NHGNPYLLTD VLEARMGFDG FVVGDWNGHG | 360 |
| QVEGCSNESC PLAVNAGLDV FMVPTAAWKP LYENTIAQVK SGLISQARID DAVSRILRVK | 420 |
| IRAGLFEKPS PAKRPLSGKT ELIGQASHRD VARQAVRESL VLLKNNQHLL PLSPKAKVLV | 480 |
| AGDAADNIGK QSGGWSITWQ GTDNQNADFP GATSIYAGIA KAVSASGGSA VLSVDGQFDA | 540 |
| ANKPDVAIVV FGEEPYAEGN GDIDNLEYQR GNKRDLALLQ KLKAAGIPVV SVFISGRPLW | 600 |
| VNPELNASDA FVAAWLPGTE GAGISEVLFT QANGDVQYDF NGKLSFSWPS TPQQTQVNVH | 660 |
| DSDYSPLLPY GYGLSYADKA NSTAPAILSN SLSEDNFSEQ VQLSQKPLFE RAVKAPWKML | 720 |
| IGSVEGDKVS MEPIASSVQS NDVVTIKTFD KQVQEDARHV SFNGKALGFV SLQGNFPEDL | 780 |
| RAYLASKSVL SMQVKVGSSI KAPVNVGMTC EGDCRANVDI STQLSALSLD TWSELNIDLT | 840 |
| CYQGQGIDFG KIISPFTLSS SGAVDISFSD IILKPKTASM ASVECP | 886 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.08 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(163-383)
| MSVIALRPKT FSLSLLAVLT CASLSGCSKT EQIKAADSQS VKPSDVAASS SPNSPNGYSI | 60 |
| NGKSTDINIW PQLTIPHKNH EDVEKRVADL LAKMTLEQKV AQMIQPEIRD ITVEDMRKYG | 120 |
| FGSYLNGGGS YPNQDKHATP ADWIALADAM YQASMDDSLD GISIPTMWGT DAVHGHNNVI | 180 |
| GATLFPHNIG LGAAHHPELI QQIAAITAKE VMVTGIDWVF APTVAVVRDD RWGRTYEGYS | 240 |
| EDPVIVKSYS HAIVEGLQGG NDKDFLSDQH VIATVKHFLG DGGTEGGDDQ GDNIASEQAL | 300 |
| FDIHAQGYVG GLTAGAQTVM ASFNSWHGAK NHGNPYLLTD VLEARMGFDG FVVGDWNGHG | 360 |
| QVEGCSNESC PLAVNAGLDV FMVPTAAWKP LYENTIAQVK SGLISQARID DAVSRILRVK | 420 |
| IRAGLFEKPS PAKRPLSGKT ELIGQASHRD VARQAVRESL VLLKNNQHLL PLSPKAKVLV | 480 |
| AGDAADNIGK QSGGWSITWQ GTDNQNADFP GATSIYAGIA KAVSASGGSA VLSVDGQFDA | 540 |
| ANKPDVAIVV FGEEPYAEGN GDIDNLEYQR GNKRDLALLQ KLKAAGIPVV SVFISGRPLW | 600 |
| VNPELNASDA FVAAWLPGTE GAGISEVLFT QANGDVQYDF NGKLSFSWPS TPQQTQVNVH | 660 |
| DSDYSPLLPY GYGLSYADKA NSTAPAILSN SLSEDNFSEQ VQLSQKPLFE RAVKAPWKML | 720 |
| IGSVEGDKVS MEPIASSVQS NDVVTIKTFD KQVQEDARHV SFNGKALGFV SLQGNFPEDL | 780 |
| RAYLASKSVL SMQVKVGSSI KAPVNVGMTC EGDCRANVDI STQLSALSLD TWSELNIDLT | 840 |
| CYQGQGIDFG KIISPFTLSS SGAVDISFSD IILKPKTASM ASVECP | 886 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.