CAZyme3D

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Entry ID

Information for CAZyme ID: AEE93223.1

Basic Information

GenBank IDAEE93223.1
FamilyGH116
Sequence Length652
UniProt IDF4B5C9(100,100)Download
Average pLDDT?94.41
CAZy50 ID43576
CAZy50 RepNo, ACR43217.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID933801
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusAcidianus
SpeciesAcidianus hospitalis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKLANNFGIP  IGSLGTGKID  FFNDLTIGNA  TIMNNWSNPL  RVIRGFHIVD  LSTSMFLQGN60
PARNSEIKFE  VKIPKSIEAN  ALFPEVEYEI  KNPDFTIKVY  SPFVPNDLKD  SSLPLIVFNI120
KGKGIIAISF  PNLTGSRRWG  RVNYKIEGKV  NGVLMTNLKA  LQSDPAYGEI  FLGCQGCHSY180
VGYRYWIPAL  KEGMTEDVSI  FNLDKLKEGE  GINRYYIKPY  AREEIGGIVW  KEIDGEENFY240
LTWFFNGRPG  YYPYGHYYEN  WFQSAVDVAE  YALKRKPKVE  LDNTQDWIND  AVRNSMYVLT300
YSWLTKDGRL  AVYEDPQISL  LMNTIGGMTW  DSLSFALLEY  FPELVKKMDE  HFGNFIIDGE360
VPHDLGEESI  ENPIYGASYP  YSWNDLGPTW  ILMIYRDYKF  TNDLSFLKRN  YNKMKEVIDW420
LIKKDEDNDG  IPDSKGGFDN  SYDGTYMYGT  SSYIGSLFLC  ALKAFIESSK  ILSYDYSKYE480
EILNKAKSSL  ESLWNGRYFI  NWKYKDQKNE  SCLNSQLLGE  FWCNLLGLGN  VIDEDKIKTA540
LKYIYEHNGK  ASKYCLVNSV  NPDGSIDEST  DQMKSCWPRI  SFAIASHMIM  KGMINEGIEI600
ARKEWETISS  RYPYNQPSKI  NAFNGEHFGL  PYYIGSLSIY  LVKYAIKNTP  HR652

Predicted 3D structure by AlphaFold2 with pLDDT = 94.41 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH116(308-642)

MKLANNFGIP  IGSLGTGKID  FFNDLTIGNA  TIMNNWSNPL  RVIRGFHIVD  LSTSMFLQGN60
PARNSEIKFE  VKIPKSIEAN  ALFPEVEYEI  KNPDFTIKVY  SPFVPNDLKD  SSLPLIVFNI120
KGKGIIAISF  PNLTGSRRWG  RVNYKIEGKV  NGVLMTNLKA  LQSDPAYGEI  FLGCQGCHSY180
VGYRYWIPAL  KEGMTEDVSI  FNLDKLKEGE  GINRYYIKPY  AREEIGGIVW  KEIDGEENFY240
LTWFFNGRPG  YYPYGHYYEN  WFQSAVDVAE  YALKRKPKVE  LDNTQDWIND  AVRNSMYVLT300
YSWLTKDGRL  AVYEDPQISL  LMNTIGGMTW  DSLSFALLEY  FPELVKKMDE  HFGNFIIDGE360
VPHDLGEESI  ENPIYGASYP  YSWNDLGPTW  ILMIYRDYKF  TNDLSFLKRN  YNKMKEVIDW420
LIKKDEDNDG  IPDSKGGFDN  SYDGTYMYGT  SSYIGSLFLC  ALKAFIESSK  ILSYDYSKYE480
EILNKAKSSL  ESLWNGRYFI  NWKYKDQKNE  SCLNSQLLGE  FWCNLLGLGN  VIDEDKIKTA540
LKYIYEHNGK  ASKYCLVNSV  NPDGSIDEST  DQMKSCWPRI  SFAIASHMIM  KGMINEGIEI600
ARKEWETISS  RYPYNQPSKI  NAFNGEHFGL  PYYIGSLSIY  LVKYAIKNTP  HR652

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help