Information for CAZyme ID: AEE86282.1
Basic Information
| GenBank ID | AEE86282.1 |
| Family | CBM22, GH10 |
| Sequence Length | 576 |
| UniProt ID | F4JJU7(100,100) |
| Average pLDDT? | 93.45 |
| CAZy50 ID | 2788 |
| CAZy50 Rep | No, CAE6160978.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3702 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Brassicales |
| Family | Brassicaceae |
| Genus | Arabidopsis |
| Species | Arabidopsis thaliana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKLLLLLPLA FCCLSLSRCE EILVPYDYSA TIECLEIPYK PQYNGGIIVN PDMQNGSQGW | 60 |
| SQFENAKVNF REFGGNKFVV ATQRNQSSDS VSQKVYLEKG ILYTFSAWLQ VSTGKAPVSA | 120 |
| VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT | 180 |
| QDEWNAHQEQ SIDNSRKGPV RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ | 240 |
| AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP | 300 |
| KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN | 360 |
| IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR ELQSIRVRGN IPLGIGLESH | 420 |
| FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW | 480 |
| TAYAPNCYHM CLTDGNFKNL PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD | 540 |
| LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV | 576 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.45 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM22(47-162)+GH10(222-485)
| MKLLLLLPLA FCCLSLSRCE EILVPYDYSA TIECLEIPYK PQYNGGIIVN PDMQNGSQGW | 60 |
| SQFENAKVNF REFGGNKFVV ATQRNQSSDS VSQKVYLEKG ILYTFSAWLQ VSTGKAPVSA | 120 |
| VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT | 180 |
| QDEWNAHQEQ SIDNSRKGPV RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ | 240 |
| AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP | 300 |
| KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN | 360 |
| IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR ELQSIRVRGN IPLGIGLESH | 420 |
| FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW | 480 |
| TAYAPNCYHM CLTDGNFKNL PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD | 540 |
| LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV | 576 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.