Information for CAZyme ID: AEE34983.1
Basic Information
GenBank ID | AEE34983.1 |
Family | CBM45, GH13_6 |
Sequence Length | 887 |
UniProt ID | Q94A41(100,100)![]() |
Average pLDDT? | 77.06 |
CAZy50 ID | 16693 |
CAZy50 Rep | No, CAG1830528.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 3702 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Brassicales |
Family | Brassicaceae |
Genus | Arabidopsis |
Species | Arabidopsis thaliana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MSTVPIESLL HHSYLRHNSK VNRGNRSFIP ISLNLRSHFT SNKLLHSIGK SVGVSSMNKS | 60 |
PVAIRATSSD TAVVETAQSD DVIFKEIFPV QRIEKAEGKI YVRLKEVKEK NWELSVGCSI | 120 |
PGKWILHWGV SYVGDTGSEW DQPPEDMRPP GSIAIKDYAI ETPLKKLSEG DSFFEVAINL | 180 |
NLESSVAALN FVLKDEETGA WYQHKGRDFK VPLVDDVPDN GNLIGAKKGF GALGQLSNIP | 240 |
LKQDKSSAET DSIEERKGLQ EFYEEMPISK RVADDNSVSV TARKCPETSK NIVSIETDLP | 300 |
GDVTVHWGVC KNGTKKWEIP SEPYPEETSL FKNKALRTRL QRKDDGNGSF GLFSLDGKLE | 360 |
GLCFVLKLNE NTWLNYRGED FYVPFLTSSS SPVETEAAQV SKPKRKTDKE VSASGFTKEI | 420 |
ITEIRNLAID ISSHKNQKTN VKEVQENILQ EIEKLAAEAY SIFRSTTPAF SEEGVLEAEA | 480 |
DKPDIKISSG TGSGFEILCQ GFNWESNKSG RWYLELQEKA DELASLGFTV LWLPPPTESV | 540 |
SPEGYMPKDL YNLNSRYGTI DELKDTVKKF HKVGIKVLGD AVLNHRCAHF KNQNGVWNLF | 600 |
GGRLNWDDRA VVADDPHFQG RGNKSSGDNF HAAPNIDHSQ DFVRKDIKEW LCWMMEEVGY | 660 |
DGWRLDFVRG FWGGYVKDYM DASKPYFAVG EYWDSLSYTY GEMDYNQDAH RQRIVDWINA | 720 |
TSGAAGAFDV TTKGILHTAL QKCEYWRLSD PKGKPPGVVG WWPSRAVTFI ENHDTGSTQG | 780 |
HWRFPEGKEM QGYAYILTHP GTPAVFFDHI FSDYHSEIAA LLSLRNRQKL HCRSEVNIDK | 840 |
SERDVYAAII DEKVAMKIGP GHYEPPNGSQ NWSVAVEGRD YKVWETS | 887 |
Predicted 3D structure by AlphaFold2 with pLDDT = 77.06 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM45(126-209)+CBM45(305-381)+GH13_6(521-806)
MSTVPIESLL HHSYLRHNSK VNRGNRSFIP ISLNLRSHFT SNKLLHSIGK SVGVSSMNKS | 60 |
PVAIRATSSD TAVVETAQSD DVIFKEIFPV QRIEKAEGKI YVRLKEVKEK NWELSVGCSI | 120 |
PGKWILHWGV SYVGDTGSEW DQPPEDMRPP GSIAIKDYAI ETPLKKLSEG DSFFEVAINL | 180 |
NLESSVAALN FVLKDEETGA WYQHKGRDFK VPLVDDVPDN GNLIGAKKGF GALGQLSNIP | 240 |
LKQDKSSAET DSIEERKGLQ EFYEEMPISK RVADDNSVSV TARKCPETSK NIVSIETDLP | 300 |
GDVTVHWGVC KNGTKKWEIP SEPYPEETSL FKNKALRTRL QRKDDGNGSF GLFSLDGKLE | 360 |
GLCFVLKLNE NTWLNYRGED FYVPFLTSSS SPVETEAAQV SKPKRKTDKE VSASGFTKEI | 420 |
ITEIRNLAID ISSHKNQKTN VKEVQENILQ EIEKLAAEAY SIFRSTTPAF SEEGVLEAEA | 480 |
DKPDIKISSG TGSGFEILCQ GFNWESNKSG RWYLELQEKA DELASLGFTV LWLPPPTESV | 540 |
SPEGYMPKDL YNLNSRYGTI DELKDTVKKF HKVGIKVLGD AVLNHRCAHF KNQNGVWNLF | 600 |
GGRLNWDDRA VVADDPHFQG RGNKSSGDNF HAAPNIDHSQ DFVRKDIKEW LCWMMEEVGY | 660 |
DGWRLDFVRG FWGGYVKDYM DASKPYFAVG EYWDSLSYTY GEMDYNQDAH RQRIVDWINA | 720 |
TSGAAGAFDV TTKGILHTAL QKCEYWRLSD PKGKPPGVVG WWPSRAVTFI ENHDTGSTQG | 780 |
HWRFPEGKEM QGYAYILTHP GTPAVFFDHI FSDYHSEIAA LLSLRNRQKL HCRSEVNIDK | 840 |
SERDVYAAII DEKVAMKIGP GHYEPPNGSQ NWSVAVEGRD YKVWETS | 887 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.