Information for CAZyme ID: AEE32368.1
Basic Information
GenBank ID | AEE32368.1 |
Family | CBM49, GH9 |
Sequence Length | 627 |
UniProt ID | Q9M995(100,100)![]() |
Average pLDDT? | 89.93 |
CAZy50 ID | 45516 |
CAZy50 Rep | No, CAG7875685.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 3702 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Brassicales |
Family | Brassicaceae |
Genus | Arabidopsis |
Species | Arabidopsis thaliana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG | 60 |
PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW AAVDNRKELS SSNQMQQTLW | 120 |
SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE | 180 |
TAAALAAASL AFKPFNSSYS ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE | 240 |
LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG | 300 |
GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS | 360 |
DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG MSYVVGYGPK YPIRVHHRGS | 420 |
SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL | 480 |
SGTAPLVGLF AKLYGGSLGS YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS | 540 |
ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK | 600 |
TLRAGQAYDF VYVQGGPQAK VSVLSYN | 627 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.93 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH9(30-491)+CBM49(535-614)
MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG | 60 |
PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW AAVDNRKELS SSNQMQQTLW | 120 |
SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE | 180 |
TAAALAAASL AFKPFNSSYS ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE | 240 |
LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG | 300 |
GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS | 360 |
DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG MSYVVGYGPK YPIRVHHRGS | 420 |
SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL | 480 |
SGTAPLVGLF AKLYGGSLGS YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS | 540 |
ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK | 600 |
TLRAGQAYDF VYVQGGPQAK VSVLSYN | 627 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.