Information for CAZyme ID: AEE32093.1
Basic Information
| GenBank ID | AEE32093.1 |
| Family | GH1 |
| Sequence Length | 512 |
| UniProt ID | Q3ECW8(100,100) |
| Average pLDDT? | 89.81 |
| CAZy50 ID | 33084 |
| CAZy50 Rep | No, CAE6172860.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3702 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Brassicales |
| Family | Brassicaceae |
| Genus | Arabidopsis |
| Species | Arabidopsis thaliana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MEDVLTLITM IVLLLLAFHG FGKCSSDLYS RSDFPEGFVF GAGISAYQWE GAVDEDGRKP | 60 |
| SVWDTFLHCR KMDNGDIACD GYHKYKEDVQ LMAETGLHTF RFSISWSRLI SNGRGSINPK | 120 |
| GLQFYKNFIQ ELVKHGIEPH VTLHHYDFPQ YLEDDYGGWT NRKIIKDFTA YADVCFREFG | 180 |
| NHVKFWTTIN EANIFTIGGY NDGNSPPGRC SFPGRNCTLG NSSTETYIVG HNLLLAHASV | 240 |
| SRLYKQKYKD IQGGSVGFSL FAMNFTPSTN SKDDEIATKR ANDFYLGWML EPLIYGDYPD | 300 |
| VMKRTIGSRL PVFSKEESEQ VKGSSDFIGV IHYLTALVTN IDINPSLSGI PDFNSDMVLS | 360 |
| MRVRISRLPN SDEKCLIFFI TLSILEYIKQ SYGNPPVYIL ENGKTMNQDL ELQQKDTPRI | 420 |
| EYLDAYIGAV LKAVRNGSDT RGYFVWSFMD LYELLNGYKS SFGLYSVNFS DPHRKRSPKL | 480 |
| SAHWYSGFLK GKPTFLGSQG ITQLHSNFSS SR | 512 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.81 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH1(31-490)
| MEDVLTLITM IVLLLLAFHG FGKCSSDLYS RSDFPEGFVF GAGISAYQWE GAVDEDGRKP | 60 |
| SVWDTFLHCR KMDNGDIACD GYHKYKEDVQ LMAETGLHTF RFSISWSRLI SNGRGSINPK | 120 |
| GLQFYKNFIQ ELVKHGIEPH VTLHHYDFPQ YLEDDYGGWT NRKIIKDFTA YADVCFREFG | 180 |
| NHVKFWTTIN EANIFTIGGY NDGNSPPGRC SFPGRNCTLG NSSTETYIVG HNLLLAHASV | 240 |
| SRLYKQKYKD IQGGSVGFSL FAMNFTPSTN SKDDEIATKR ANDFYLGWML EPLIYGDYPD | 300 |
| VMKRTIGSRL PVFSKEESEQ VKGSSDFIGV IHYLTALVTN IDINPSLSGI PDFNSDMGES | 360 |
| INILSMRVRI SRLPNSDEKC LIFFITLSIL EYIKQSYGNP PVYILENGKT MNQDLELQQK | 420 |
| DTPRIEYLDA YIGAVLKAVR NGSDTRGYFV WSFMDLYELL NGYKSSFGLY SVNFSDPHRK | 480 |
| RSPKLSAHWY SGFLKGKPTF LGSQGITQLH SNFSSSR | 517 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.