Information for CAZyme ID: AEC06396.1
Basic Information
GenBank ID | AEC06396.1 |
Family | GT37 |
Sequence Length | 535 |
UniProt ID | Q9SJP2(100,100)![]() |
Average pLDDT? | 87.69 |
CAZy50 ID | 10671 |
CAZy50 Rep | No, VDD56044.1 |
Structure Cluster | - |
EC Number(s) | 2.4.1.- |
Substrates(s) | - |
Taxonomy
Tax ID | 3702 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Brassicales |
Family | Brassicaceae |
Genus | Arabidopsis |
Species | Arabidopsis thaliana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MYHIFQISGE VIKGLGLKTK ILITIVFSTL LILSVMLLSF SNNFNNKLFA ATINDESETP | 60 |
GRDRLIGGLL TADFDEGSCL SRYHKTFLYR KPSPYKPSEY LVSKLRSYEM LHKRCGPGTK | 120 |
AYKEATKHLS HDENYNASKS DGECRYVVWL ADYGLGNRLL TLASVFLYAL LTDRIILVDN | 180 |
RKDIGDLLCE PFPGTSWLLP LDFPLMKYAD GYHKGYSRCY GTMLENHSIN STSFPPHLYM | 240 |
HNLHDSRDSD KMFFCQKDQS LIDKVPWLIF RANVYFVPSL WFNPTFQTEL TKLFPQKETV | 300 |
FHHLGRYLFH PKNQVWDIVT KYYHDHLSKA DERLGIQIRV FRDQGGYYQH VMDQVISCTQ | 360 |
REKLLPELAT QEESKVNISN IPKSKAVLVT SLSPEYSKKL ENMFSERANM TGEIIKVYQP | 420 |
SGERYQQTDK KVHDQKALAE MYLLSLTDNI VASSRSTFGY VAYSLGGLKP WLLYLPNDNK | 480 |
APDPPCVRST SMEPCFLTPP THGCEPDAWG TESGKVVPFV RYCEDIWGLK LFDEL | 535 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.69 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT37(57-505)
MYHIFQISGE VIKGLGLKTK ILITIVFSTL LILSVMLLSF SNNFNNKLFA ATINDESETP | 60 |
GRDRLIGGLL TADFDEGSCL SRYHKTFLYR KPSPYKPSEY LVSKLRSYEM LHKRCGPGTK | 120 |
AYKEATKHLS HDENYNASKS DGECRYVVWL ADYGLGNRLL TLASVFLYAL LTDRIILVDN | 180 |
RKDIGDLLCE PFPGTSWLLP LDFPLMKYAD GYHKGYSRCY GTMLENHSIN STSFPPHLYM | 240 |
HNLHDSRDSD KMFFCQKDQS LIDKVPWLIF RANVYFVPSL WFNPTFQTEL TKLFPQKETV | 300 |
FHHLGRYLFH PKNQVWDIVT KYYHDHLSKA DERLGIQIRV FRDQGGYYQH VMDQVISCTQ | 360 |
REKLLPELAT QEESKVNISN IPKSKAVLVT SLSPEYSKKL ENMFSERANM TGEIIKVYQP | 420 |
SGERYQQTDK KVHDQKALAE MYLLSLTDNI VASSRSTFGY VAYSLGGLKP WLLYLPNDNK | 480 |
APDPPCVRST SMEPCFLTPP THGCEPDAWG TESGKVVPFV RYCEDIWGLK LFDEL | 535 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.