CAZyme3D

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Entry ID

Information for CAZyme ID: ADY73924.1

Basic Information

GenBank IDADY73924.1
FamilyGT2
Sequence Length258
UniProt IDF0S146(100,100)Download
Average pLDDT?94.39
CAZy50 ID15699
CAZy50 RepNo, ADU96547.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID868864
KingdomBacteria
PhylumAquificota
ClassAquificae
OrderDesulfurobacteriales
FamilyDesulfurobacteriaceae
GenusDesulfurobacterium
SpeciesDesulfurobacterium thermolithotrophum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGNKKGISLL  IPTYNRPHFL  RRALISVLNQ  TRLPDEIIIS  DDNPHSTENF  EAIKDLVEQY60
KGLIKYWKNN  ERLGVEKNYS  KLLEEANYEY  IKFLADDDLL  HPEALELMEK  VLNKYEDVVL120
VSSHRIPVNE  EEEFIHGIEA  TKPLCKKDQI  LNGKEVIRKS  LTDLKNYVGE  FSTYMFRKSL180
LDINPFYFCN  LHFRANADWV  LWMYLLSKGN  FFYYSRPLSF  FTIHSQQDQA  NLKVQTLGFK240
ERIKLILNEE  LHKTLKFF258

Predicted 3D structure by AlphaFold2 with pLDDT = 94.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(8-174)

MGNKKGISLL  IPTYNRPHFL  RRALISVLNQ  TRLPDEIIIS  DDNPHSTENF  EAIKDLVEQY60
KGLIKYWKNN  ERLGVEKNYS  KLLEEANYEY  IKFLADDDLL  HPEALELMEK  VLNKYEDVVL120
VSSHRIPVNE  EEEFIHGIEA  TKPLCKKDQI  LNGKEVIRKS  LTDLKNYVGE  FSTYMFRKSL180
LDINPFYFCN  LHFRANADWV  LWMYLLSKGN  FFYYSRPLSF  FTIHSQQDQA  NLKVQTLGFK240
ERIKLILNEE  LHKTLKFF258

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help